published Published over 2 years ago
CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies
R
@ramadatta
published Published over 2 years ago
scikit-fem: A Python package for finite element assembly
Python
@kinnala
published Published about 4 years ago
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats
Perl C++ Python
@edawson
published Published almost 5 years ago
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome
Perl R
@nterhoeven
published Published about 5 years ago
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data
R Perl
@greatfireball
published Published over 5 years ago
Kindel: indel-aware consensus for nucleotide sequence alignments
Python Jupyter Notebook
@bede
published Published over 5 years ago
khmer release v2.1: software for biological sequence analysis
Python C++ Roff
@standage
published Published about 6 years ago
Multilocus sequence typing by blast from de novo assemblies against PubMLST
Perl
@andrewjpage
published Published about 6 years ago
RAILS and Cobbler: Scaffolding and automated finishing of draft genomes using long DNA sequences
Perl
@warrenlr
published Published over 6 years ago
