published Published 21 days ago
GraphBin-Tk: assembly graph-based metagenomic binning toolkit
Python
published Published 7 months ago
Finding and removing introns from RNA-Seq de novo assemblies with IntronSeeker
Perl Python
published Published 9 months ago
Binette: a fast and accurate bin refinement tool to construct high quality Metagenome Assembled Genomes.
Python
published Published over 1 year ago
Shapelets: A Python package implementing shapelet functions and their applications
Python
published Published over 4 years ago
CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies
R
published Published almost 5 years ago
scikit-fem: A Python package for finite element assembly
Python
published Published over 6 years ago
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats
Perl C++ Python
published Published over 7 years ago
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome
Perl R
published Published over 7 years ago
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data
R Perl
published Published almost 8 years ago