published Published 4 months ago
Fetpype: An Open-Source Pipeline for Reproducible Fetal Brain MRI Analysis
Python
@t-sanchez
published Published 7 months ago
nf-core/cutandrun: A Nextflow pipeline for the analysis of CUT&RUN, CUT&Tag and TIP-seq datasets
Awk Python Perl Nextflow
@tamara-hodgetts
@FabrizioMusacchio
published Published over 2 years ago
Reducing the efforts to create reproducible analysis code with FieldTrip
MATLAB Mathematica
@matsvanes
published Published over 3 years ago
MetaGenePipe: An Automated, Portable Pipeline for Contig-based Functional and Taxonomic Analysis
wdl Jupyter Notebook Python
@ParkvilleData
published Published over 5 years ago
The stantargets R package: a workflow framework for efficient reproducible Stan-powered Bayesian data analysis pipelines
R Stan
@wlandau
published Published about 6 years ago
dantro: a Python package for handling, transforming, and visualizing hierarchically structured data
Python
@blsqr
published Published about 8 years ago
RNAsik: A Pipeline for complete and reproducible RNA-seq analysis that runs anywhere with speed and ease
C Python
@serine
published Published about 8 years ago
TDAstats: R pipeline for computing persistent homology in topological data analysis
R C++
@rrrlw
published Published about 10 years ago
@sbogutzky
