tag:joss.theoj.org,2005:/papers/tagged/R%20shinyJournal of Open Source Software2023-08-01T15:14:10ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/43022023-08-01T15:14:10Z2023-08-02T00:01:42ZShiny tools for management rules: interactive applications that aid in conservation strategies for North Atlantic right whalesacceptedv1.0.02023-03-11 04:50:58 UTC882023-08-01 15:14:10 UTC820235436LeahM.CroweIntegrated Statistics under contract to the Northeast Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, USA0000-0001-9133-8522TimV. n.ColeNortheast Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, USA0000-0001-9046-2169HeatherJ.FoleyIntegrated Statistics under contract to the Northeast Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, USA0000-0003-0898-3008DanielleM.CholewiakNortheast Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, USA10.21105/joss.05436https://doi.org/10.5281/zenodo.8127594R, Standard MLhttps://joss.theoj.org/papers/10.21105/joss.05436.pdfright whales, trigger analysis, conservation, managementtag:joss.theoj.org,2005:Paper/44362023-06-10T12:39:03Z2023-06-12T07:55:31ZReference Point Calculator (RPC): A Shiny app for exploration of limit reference points for fisheries managementaccepted0.4.02023-04-17 20:07:34 UTC862023-06-10 12:39:03 UTC820235418QuangC.HuynhBlue Matter Science, North Vancouver, BC, Canada0000-0001-7835-4376TomR.CarruthersBlue Matter Science, North Vancouver, BC, Canada0000-0001-9173-9043AdrianR.HordykBlue Matter Science, North Vancouver, BC, Canada0000-0001-5620-344610.21105/joss.05418https://doi.org/10.5281/zenodo.8000031R, Less, SCSShttps://joss.theoj.org/papers/10.21105/joss.05418.pdfreference points, population dynamics, fisheries science, management strategy evaluationtag:joss.theoj.org,2005:Paper/37412022-12-01T16:06:13Z2022-12-02T00:01:05ZactivAnalyzer: An R Shiny app to analyse ActiGraph accelerometer data and to implement the use of the PROactive Physical Activity in COPD instrumentsacceptedv1.0.42022-07-22 23:30:38 UTC802022-12-01 16:06:13 UTC720224741Pierre-Yvesde MüllenheimInstitut de formation en éducation physique et en sport d'Angers (IFEPSA-UCO), Les Ponts-de-Cé, France0000-0001-9157-7371ArnaudChambellanGroupement des Hôpitaux de l’Institut Catholique de Lille (GHICL), Hôpital Saint Philibert, Lomme, France0000-0002-7860-188010.21105/joss.04741https://doi.org/10.5281/zenodo.7384191Rhttps://joss.theoj.org/papers/10.21105/joss.04741.pdfphysical activity, sedentary behaviour, accelerometer, actigraph, COPD, PROactive instruments, Shinytag:joss.theoj.org,2005:Paper/33862022-06-09T23:19:11Z2022-06-10T01:21:12ZVIEWpoly: a visualization tool to integrate and explore results of polyploid genetic analysisacceptedv0.1.12022-02-21 19:51:00 UTC742022-06-09 23:19:11 UTC720224242CristianeHayumiTanigutiDepartment of Horticultural Sciences, Texas A&M University, College Station, TX, USA0000-0002-2021-6883GabrielSiqueirade GesteiraBioinformatics Research Center, Department of Horticultural Sciences, North Carolina State University, Raleigh, NC, USA0000-0002-4106-7346JeekinLauDepartment of Horticultural Sciences, Texas A&M University, College Station, TX, USA0000-0003-1114-6892GuilhermeSilvada PereiraDepartment of Agronomy, Federal University of Viçosa, Brazil0000-0002-7106-8630Zhao-BangZengBioinformatics Research Center, Department of Horticultural Sciences, North Carolina State University, Raleigh, NC, USA0000-0002-3115-1149DavidByrneDepartment of Horticultural Sciences, Texas A&M University, College Station, TX, USA0000-0001-5460-2419OscarRiera-LizarazuDepartment of Horticultural Sciences, Texas A&M University, College Station, TX, USA0000-0002-7477-4063MarceloMollinariBioinformatics Research Center, Department of Horticultural Sciences, North Carolina State University, Raleigh, NC, USA0000-0002-7001-849810.21105/joss.04242https://doi.org/10.5281/zenodo.6621089Rhttps://joss.theoj.org/papers/10.21105/joss.04242.pdfShiny, Linkage map, QTL, Polyploidtag:joss.theoj.org,2005:Paper/31472022-03-15T10:12:41Z2022-03-15T10:48:13Zmmrefpoints: Projecting long-term marine mammal abundance with bycatchacceptedv0.1.12021-11-02 00:12:18 UTC712022-03-15 10:12:41 UTC720223888MargaretC.SipleResource Assessment and Conservation Engineering Division, Alaska Fisheries Science Center, National Oceanic and Atmospheric Administration, Seattle, WA, 98115, USA0000-0002-4260-9856AndréE.PuntSchool of Aquatic and Fishery Sciences, University of Washington, 1122 NE Boat St, Seattle, WA 981150000-0001-8489-2488TessaB.FrancisPuget Sound Institute, University of Washington Tacoma, 326 East D Street, Tacoma, WA 98421, USA0000-0002-3383-5392PhilipS.HammondSea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, Fife KY16 8LB, UK0000-0002-2381-8302DennisHeinemannU.S. Marine Mammal Commission, 4340 East-West Hwy, Rm 700, Bethesda, MD 20814, USA0000-0002-1434-2445KristyJ.LongOffice of Protected Resources, NOAA's National Marine Fisheries Service, Silver Spring, MD 20910, USA0000-0001-6970-0935JeffreyMooreProtected Resources Division, NOAA SWFSC, La Jolla, CA 92037, USA0000-0003-3715-7442MaritzaSepúlvedaFacultad de Ciencias, Universidad de Valparaíso, Gran Bretaña 1111, Playa Ancha, Valparaíso, Chile0000-0002-1403-176XRandallR.ReevesOkapi Wildlife Associates, Hudson, Quebec, Canada0000-0002-6512-6507GuðjónMárSigurðssonMarine and Freshwater Research Institute, Skúlagata 4, 121, Reykjavík, Iceland0000-0001-9390-6693GísliVíkingssonMarine and Freshwater Research Institute, Skúlagata 4, 121, Reykjavík, Iceland0000-0002-4501-193XPaulR.WadeMarine Mammal Laboratory, NOAA AFSC, Seattle, WA, 98115-6349, USA0000-0003-2428-9323RobWilliamsOceans Initiative, 117 E. Louisa Street No. 135. Seattle, WA 98102, USA0000-0001-7496-453XAlexandreN.ZerbiniCascadia Research Collective, 218 ½ 4th Ave W, Olympia, WA, 98501, USA0000-0002-9776-660510.21105/joss.03888https://doi.org/10.5281/zenodo.6338110Rhttps://joss.theoj.org/papers/10.21105/joss.03888.pdfShiny, marine mammal bycatchtag:joss.theoj.org,2005:Paper/32762022-02-05T08:51:10Z2022-02-14T15:22:22Zvisxhclust: An R Shiny package for visual exploration of hierarchical clusteringaccepted1.0.02022-01-11 13:30:50 UTC702022-02-05 08:51:10 UTC720224074RafaelHenkinCentre for Translational Bioinformatics, William Harvey Research Institute, Faculty of Medicine and Dentistry, Queen Mary University of London0000-0002-5511-5230MichaelR.BarnesCentre for Translational Bioinformatics, William Harvey Research Institute, Faculty of Medicine and Dentistry, Queen Mary University of London0000-0001-9097-738110.21105/joss.04074https://doi.org/10.5281/zenodo.5946818Rhttps://joss.theoj.org/papers/10.21105/joss.04074.pdfclustering, interactive visualization, visual analytics, Shinytag:joss.theoj.org,2005:Paper/30722021-11-17T07:13:23Z2021-11-18T00:02:27Zcofad: An R package and shiny app for contrast analysisacceptedv0.2.02021-09-21 11:23:32 UTC672021-11-17 07:13:23 UTC620213822JohannesTitzDepartment of Psychology, TU Chemnitz, Germany0000-0002-1102-5719MarkusBurkhardtDepartment of Psychology, TU Chemnitz, Germany0000-0002-2498-299910.21105/joss.03822https://doi.org/10.5281/zenodo.5702779Rhttps://joss.theoj.org/papers/10.21105/joss.03822.pdfcontrast analysis, factorial design, shinytag:joss.theoj.org,2005:Paper/27002021-10-21T13:30:14Z2021-10-22T00:01:23ZfishRman: A Shiny R Dashboard improving Global Fishing Watch data availabilityacceptedv1.0.02021-06-01 07:04:09 UTC662021-10-21 13:30:14 UTC620213467PasqualeBuonomoOpen-Source for Marine and Ocean Sciences (OSMOS)0000-0002-1848-931310.21105/joss.03467https://doi.org/10.5281/zenodo.5582567Rhttps://joss.theoj.org/papers/10.21105/joss.03467.pdffisheries, marine biology, global fishing watch, AIS data, dashboard, shiny, spatial analysistag:joss.theoj.org,2005:Paper/28002021-07-23T14:51:42Z2021-07-24T00:03:18Zpollucheck v1.0: A package to explore open-source air pollution dataaccepted1.0.02021-06-18 04:15:50 UTC632021-07-23 14:51:42 UTC620213435AdithiR.UpadhyaILK Labs, Bengaluru, India0000-0002-1764-1379PratyushAgrawalILK Labs, Bengaluru, IndiaSreekanthVakacherlaCenter for Study of Science, Technology and Policy, Bengaluru, India0000-0003-0400-6584MeenakshiKushwahaILK Labs, Bengaluru, India10.21105/joss.03435https://doi.org/10.5281/zenodo.5128607Rhttps://joss.theoj.org/papers/10.21105/joss.03435.pdfopen-source, air quality, shinytag:joss.theoj.org,2005:Paper/27512021-07-18T07:53:56Z2021-07-19T00:00:12ZgrapesAgri1: Collection of Shiny Apps for Data Analysis in Agricultureacceptedv1.0.02021-06-10 20:44:34 UTC632021-07-18 07:53:56 UTC620213437PratheeshP.GopinathDepartment of Agricultural Statistics, College of Agriculture, Vellayani, Kerala Agricultural University, Kerala, India.0000-0003-3290-0436RajenderParsadICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.BrigitJosephDepartment of Agricultural Statistics, College of Agriculture, Vellayani, Kerala Agricultural University, Kerala, India.AdarshV.S.Department of Agricultural Statistics, BCKV, West Bengal, India10.21105/joss.03437https://doi.org/10.5281/zenodo.5106216Rhttps://joss.theoj.org/papers/10.21105/joss.03437.pdfData analysis in Agriculture, shiny app, Design of experiments, Compare means, Field Layout, Correlation Analysis, Descriptive Statistics