JOSS Papers: Pipeline

All Papers
1347
 Published Papers
1188
 Active Papers
159
published Published 5 days ago

nf-gwas-pipeline: A Nextflow Genome-Wide Association Study Pipeline

R Python
@ZeyuanSong
10.21105/joss.02957
published Published 23 days ago

ivadomed: A Medical Imaging Deep Learning Toolbox

Python
@charleygros
10.21105/joss.02868
published Published about 2 months ago

The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing

R
@wlandau
10.21105/joss.02959
published Published 3 months ago

PypeIt: The Python Spectroscopic Data Reduction Pipeline

Python Jupyter Notebook C
@profxj
10.21105/joss.02308
published Published 7 months ago

dantro: a Python package for handling, transforming, and visualizing hierarchically structured data

Python
@blsqr
10.21105/joss.02316
published Published 12 months ago

Pippin: A pipeline for supernova cosmology

Python
@samreay
10.21105/joss.02122
published Published over 1 year ago

A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments

Python
@mgalland
10.21105/joss.01465
published Published over 2 years ago

SeqTools: A python package for easy transformation, combination and evaluation of large datasets.

Python
@nlgranger
10.21105/joss.01006
published Published over 2 years ago

RNAsik: A Pipeline for complete and reproducible RNA-seq analysis that runs anywhere with speed and ease

C Python
@serine
10.21105/joss.00583
published Published over 2 years ago

aesop: ARC Echelle Spectroscopic Observation Pipeline

Python Common Lisp eC Jupyter Notebook
@bmorris3
10.21105/joss.00854
Displaying papers 1 - 10 of 19 in total

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