tag:joss.theoj.org,2005:/papers/tagged/Parallel?page=2Journal of Open Source Software2022-03-30T20:02:38ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/29072022-03-30T20:02:38Z2022-03-31T00:00:57ZMandyoc: A finite element code to simulate thermochemical convection in parallelacceptedv0.1.12021-07-27 18:09:36 UTC712022-03-30 20:02:38 UTC720224070VictorSacekInstituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo, Brazil0000-0001-9598-5081JamisonAssunçãoInstituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo, Brazil0000-0003-2822-2417AgustinaPesceInstituto Geofísico Sismológico Ing. Volponi, Universidad Nacional de San Juan, Argentina, CONICET, Argentina0000-0002-5538-8845RafaelMonteiroda SilvaInstituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo, Brazil0000-0001-8645-244310.21105/joss.04070https://doi.org/10.5281/zenodo.6390220C++, Chttps://joss.theoj.org/papers/10.21105/joss.04070.pdfPETSc, mantle convection, lithosphere geodynamics, finite elementtag:joss.theoj.org,2005:Paper/31422022-03-16T19:04:13Z2022-03-21T09:35:03ZTriP: A Python package for the kinematic modeling of serial-parallel hybrid robotsacceptedv1.0.02021-10-30 08:49:40 UTC712022-03-16 19:04:13 UTC720223967JanBaumgärtnerHeidelberg University0000-0002-7825-3476TorbenMillerIndependent Researcher10.21105/joss.03967https://doi.org/10.5281/zenodo.6360087https://joss.theoj.org/papers/10.21105/joss.03967.pdfPython, robotics, inverse kinematics, kinematics, parallel manipulator, serial manipulatortag:joss.theoj.org,2005:Paper/22982021-09-06T01:28:18Z2021-09-07T00:00:22ZCoral: a parallel spectral solver for fluid dynamics and partial differential equationsacceptedv1.0.12021-01-07 23:05:47 UTC652021-09-06 01:28:18 UTC620212978BenjaminMiquelUniversité Paris-Saclay, CEA, CNRS, Service de Physique de l’Etat Condensé, 91191 Gif-sur-Yvette,France0000-0001-6283-038210.21105/joss.02978https://doi.org/10.5281/zenodo.5458888Fortran, Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.02978.pdffluid dynamics, PDE, fortran, chebyshev, plane layertag:joss.theoj.org,2005:Paper/27492021-09-01T13:37:15Z2021-09-02T00:01:24Zmpi4jax: Zero-copy MPI communication of JAX arraysacceptedv0.3.02021-06-10 18:15:15 UTC652021-09-01 13:37:15 UTC620213419DionHäfnerNiels Bohr Institute, University of Copenhagen, Copenhagen, Denmark0000-0002-4465-7317FilippoVicentiniInstitute of Physics, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland10.21105/joss.03419https://doi.org/10.5281/zenodo.5337529https://joss.theoj.org/papers/10.21105/joss.03419.pdfPython, JAX, MPI, high performance computing, parallel computingtag:joss.theoj.org,2005:Paper/23892021-07-10T07:21:32Z2021-07-11T00:01:32ZNyx: A Massively Parallel AMR Code for Computational Cosmologyaccepted21.02.12021-02-13 02:00:37 UTC632021-07-10 07:21:32 UTC620213068JeanSextonCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory0000-0003-2551-1678ZarijaLukicComputational Cosmology Center, Lawrence Berkeley National LaboratoryAnnAlmgrenCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory0000-0003-2103-312XChrisDaleyNational Energy Research Scientific Computing Center (NERSC), Berkeley, CA, USABrianFriesenNational Energy Research Scientific Computing Center (NERSC), Berkeley, CA, USA0000-0002-1572-1631AndrewMyersCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory0000-0001-8427-8330WeiqunZhangCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory0000-0001-8092-197410.21105/joss.03068https://doi.org/10.5281/zenodo.5059767C++, Fortranhttps://joss.theoj.org/papers/10.21105/joss.03068.pdfcosmology, hydrodynamics, dark matter, N-bodytag:joss.theoj.org,2005:Paper/23482021-05-30T19:46:41Z2021-05-31T00:00:48ZCLAIRE: Constrained Large Deformation Diffeomorphic Image Registration on Parallel Computing Architecturesacceptedv0.072021-01-22 04:21:53 UTC612021-05-30 19:46:41 UTC620213038MalteBrunnInstitute for Parallel and Distributed Systems, University StuttgartNaveenHimthaniOden Institute for Computational Engineering and Sciences, The University of Texas at AustinGeorgeBirosOden Institute for Computational Engineering and Sciences, The University of Texas at AustinMiriamMehlInstitute for Parallel and Distributed Systems, University StuttgartAndreasMangDepartment of Mathematics, University of Houston0000-0003-4605-329010.21105/joss.03038https://doi.org/10.5281/zenodo.4837427C++, Pythonhttps://joss.theoj.org/papers/10.21105/joss.03038.pdfGPUs, parallel computing, high performance computing, large deformation diffeomorphic registration, optimal control, medical imagingtag:joss.theoj.org,2005:Paper/20472021-05-13T13:24:09Z2021-05-20T20:10:30ZParaMonte: A high-performance serial/parallel Monte Carlo simulation library for C, C++, Fortranacceptedv1.2.02020-09-29 21:20:03 UTC612021-05-13 13:24:09 UTC620212741AmirShahmoradiDepartment of Physics, The University of Texas, Arlington, TX, Data Science Program, The University of Texas, Arlington, TX0000-0002-9720-8937FatemehBagheriDepartment of Physics, The University of Texas, Arlington, TX10.21105/joss.02741https://doi.org/10.5281/zenodo.4749957Python, Fortranhttps://joss.theoj.org/papers/10.21105/joss.02741.pdfC, C++, Monte Carlo, Markov Chain Monte Carlo, Uncertainty Quantification, Metropolis-Hastings, adaptive sampling, MCMC, DRAMtag:joss.theoj.org,2005:Paper/20052021-01-24T17:06:45Z2021-02-15T11:30:01Zhawen: time-harmonic wave modeling and inversion using hybridizable discontinuous Galerkin discretizationacceptedv0.1.22020-09-01 10:08:59 UTC572021-01-24 17:06:45 UTC620212699FlorianFaucherFaculty of Mathematics, University of Vienna, Oskar-Morgenstern-Platz 1, A-1090 Vienna, Austria.0000-0003-4958-751110.21105/joss.02699https://doi.org/11353/10.1144094Fortran, Chttps://joss.theoj.org/papers/10.21105/joss.02699.pdfwave equations, inverse problems, geophysics, helioseismology, Hybridizable Discontinuous Galerkin method, viscoelasticity, MPI and OpenMP parallelismtag:joss.theoj.org,2005:Paper/19522021-01-19T17:43:58Z2021-02-15T11:30:07ZSeismicMesh: Triangular meshing for seismologyacceptedv1.22020-08-21 15:21:21 UTC572021-01-19 17:43:58 UTC620212687KeithJ.RobertsResearch Center for Gas Innovation, Escola Politécnica da Universidade de São Paulo, São Paulo, Brazil.Rafaeldos SantosGioriaResearch Center for Gas Innovation, Escola Politécnica da Universidade de São Paulo, São Paulo, Brazil.WilliamJ.PringleDept. of Civil and Environmental Engineering and Earth Sciences, University of Notre Dame, 156 Fitzpatrick Hall, Notre Dame, IN, U.S.A.10.21105/joss.02687https://doi.org/10.5281/zenodo.4447042Python, C++https://joss.theoj.org/papers/10.21105/joss.02687.pdfSeismology, Mesh generation, DistMesh, Parallel mesh generationtag:joss.theoj.org,2005:Paper/14732021-01-16T14:52:59Z2021-02-15T11:31:01ZfastSF: A parallel code for computing the structure functions of turbulenceacceptedv1.0.02020-02-06 12:49:58 UTC572021-01-16 14:52:59 UTC620212185ShubhadeepSadhukhanDepartment of Physics, Indian Institute of Technology Kanpur, Kanpur 208016, India0000-0002-7278-5041ShashwatBhattacharyaDepartment of Mechanical Engineering, Indian Institute of Technology Kanpur 208016, India0000-0001-7462-7680MahendraK.VermaDepartment of Physics, Indian Institute of Technology Kanpur, Kanpur 208016, India0000-0002-3380-456110.21105/joss.02185https://doi.org/10.5281/zenodo.4420031Python, C++https://joss.theoj.org/papers/10.21105/joss.02185.pdfstructure functions, turbulence, fluid dynamics