tag:joss.theoj.org,2005:/papers/tagged/PacBioJournal of Open Source Software2019-12-11T23:26:26ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/13402019-12-11T23:26:26Z2021-02-15T11:31:21Zalignparse: A Python package for parsing complex features from high-throughput long-read sequencingaccepted0.1.02019-11-19 23:52:10 UTC442019-12-11 23:26:26 UTC420191915KatharineH.d.CrawfordBasic Sciences and Computational Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA, Department of Genome Sciences and Medical Scientist Training Program, University of Washington, Seattle, Washington, USA0000-0002-6223-4019JesseD.BloomBasic Sciences and Computational Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA, Howard Hughes Medical Institute, Seattle, Washington, USA0000-0003-1267-340810.21105/joss.01915https://doi.org/10.5281/zenodo.3569587Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.01915.pdfPacBio, deep mutational scanning, single-cell virus sequencing, genomics, sequencingtag:joss.theoj.org,2005:Paper/9092019-04-04T03:07:41Z2021-02-15T11:32:28ZBadread: simulation of error-prone long readsacceptedv0.1.32019-03-01 11:22:17 UTC362019-04-04 03:07:41 UTC420191316RyanR.WickDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Victoria 3004, Australia0000-0001-8349-077810.21105/joss.01316https://doi.org/10.5281/zenodo.2622997Pythonhttps://joss.theoj.org/papers/10.21105/joss.01316.pdflong-read sequencing, oxford nanopore, ont, pacific biosciences, pacbio