JOSS Papers: Omics

Published Papers

published Published 11 days ago

scpviz: A Python bioinformatics toolkit for Single-cell Proteomics and multi-omics analysis

Jupyter Notebook Python

10.21105/joss.10303

published Published about 1 month ago

NPLinker 2: a modular and customizable framework for paired omics analyses

Python Mustache

@justinjjvanderhooft

10.21105/joss.09528

published Published 9 months ago

Vivid Volcano: Empowering Non-Bioinformaticians to Analyze Pre-Processed Omics Data

R JavaScript

10.21105/joss.08055

published Published about 1 year ago

DIFFICE-jax: Differentiable neural-network solver for data assimilation of ice shelves in JAX

Python MATLAB Jupyter Notebook

10.21105/joss.07254

published Published over 1 year ago

A MATLAB-based Instrument Control (MIC) package for fluorescence imaging

MATLAB C++ C M

10.21105/joss.07275

published Published over 1 year ago

PhenoFeatureFinder: a python package for linking developmental phenotypes to omics features

Python Jupyter Notebook

10.21105/joss.07264

published Published over 2 years ago

cellanneal: A user-friendly deconvolution software for transcriptomics data

Python

10.21105/joss.05610

published Published about 5 years ago

OpenOmics: A bioinformatics API to integrate multi-omics datasets and interface with public databases.

Python

10.21105/joss.03249

published Published almost 7 years ago

AltamISA: a Python API for ISA-Tab files

Python

10.21105/joss.01610

published Published almost 7 years ago

The UCSCXenaTools R package: a toolkit for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq

R XQuery

10.21105/joss.01627

Displaying papers 1 - 10 of 11 in total

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