tag:joss.theoj.org,2005:/papers/tagged/Numerical%20simulationJournal of Open Source Software2023-06-23T17:52:07ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/41942023-06-23T17:52:07Z2023-06-24T06:15:47ZBasicTools: a numerical simulation toolboxaccepted1.9.02023-02-07 16:23:52 UTC862023-06-23 17:52:07 UTC820235142FelipeBordeuSafran Tech, Digital Sciences & Technologies Department, Rue des Jeunes Bois, Châteaufort, 78114 Magny-Les-Hameaux, France0000-0002-0640-5485FabienCasenaveSafran Tech, Digital Sciences & Technologies Department, Rue des Jeunes Bois, Châteaufort, 78114 Magny-Les-Hameaux, France0000-0002-8810-9128JulienCortialSafran Tech, Digital Sciences & Technologies Department, Rue des Jeunes Bois, Châteaufort, 78114 Magny-Les-Hameaux, France0000-0002-7181-956110.21105/joss.05142https://doi.org/10.5281/zenodo.8073764Python, C++, Cythonhttps://joss.theoj.org/papers/10.21105/joss.05142.pdfmesh, fields, finite elements, post-treatmenttag:joss.theoj.org,2005:Paper/39122023-03-13T12:07:49Z2023-03-14T00:04:35ZNIMPHS: Numerous Instruments to Manipulate and Post-process Hydraulic Simulationsaccepted0.4.12022-09-22 11:01:55 UTC832023-03-13 12:07:49 UTC820234868FélixOlartARTELIA, France, Université Gustave Eiffel, FranceThibaultOudartARTELIA, FranceOlivierBertrandARTELIA, FranceMehdi-PierreDaouARTELIA, France10.21105/joss.04868https://doi.org/10.5281/zenodo.7696769Pythonhttps://joss.theoj.org/papers/10.21105/joss.04868.pdfOpenFOAM, TELEMAC-MASCARET, Computational fluid dynamics, Geophysical fluid dynamics, Blendertag:joss.theoj.org,2005:Paper/35992023-02-03T19:16:38Z2023-02-04T00:00:45ZParMOO: A Python library for parallel multiobjective simulation optimizationacceptedv0.1.02022-05-13 00:36:38 UTC822023-02-03 19:16:38 UTC820234468TylerH.ChangMathematics and Computer Science Division, Argonne National Laboratory, USA0000-0001-9541-7041StefanM.WildApplied Mathematics and Computational Research Division, Lawrence Berkeley National Laboratory, USA, Mathematics and Computer Science Division, Argonne National Laboratory, USA, NAISE, Northwestern University, USA0000-0002-6099-277210.21105/joss.04468https://doi.org/10.5281/zenodo.7600559Pythonhttps://joss.theoj.org/papers/10.21105/joss.04468.pdfnumerical optimization, multiobjective optimization, response surface methodology, parallel simulationstag:joss.theoj.org,2005:Paper/16692020-09-07T23:50:55Z2021-02-15T11:30:43ZFlint: a simulator for biological and physiological models in ordinary and stochastic differential equationsacceptedv2.3.02020-05-22 02:28:34 UTC532020-09-07 23:50:55 UTC520202331TakeshiAbeGraduate School of Medicine, Yamaguchi University0000-0002-7074-4561YoshiyukiAsaiGraduate School of Medicine, Yamaguchi University0000-0001-5519-430610.21105/joss.02331https://doi.org/10.5281/zenodo.4017040M4, C++, Chttps://joss.theoj.org/papers/10.21105/joss.02331.pdfbiology, physiology, numerical analysis, simulation, ODE, SDEtag:joss.theoj.org,2005:Paper/15882020-08-31T19:30:32Z2021-02-15T11:30:52Zdfba: Software for efficient simulation of dynamic flux-balance analysis models in Pythonacceptedv0.1.62020-05-20 11:22:26 UTC522020-08-31 19:30:32 UTC520202342DavidS.TourignyColumbia University Irving Medical Center, 630 West 168th Street, New York, NY 10032 USA0000-0002-3987-8078JorgeCarrascoMurielNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Building 220, Kemitorvet, 2800 Kongens Lyngby, Denmark0000-0001-7365-0299MoritzE.BeberNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Building 220, Kemitorvet, 2800 Kongens Lyngby, Denmark0000-0003-2406-197810.21105/joss.02342https://doi.org/10.5281/zenodo.4009224Pythonhttps://joss.theoj.org/papers/10.21105/joss.02342.pdfMathematical optimization, Linear programming, Numerical simulation, Multi-scale metabolic modeling, C++tag:joss.theoj.org,2005:Paper/1452017-02-04T00:00:00Z2021-02-15T11:34:17Znse: Computation of Numerical Standard Errors in Racceptedv1-00.152017-01-11 20:43:24 UTC102017-02-04 00:00:00 UTC22017172DavidArdiaInstitute of Financial Analysis - University of Neuchâtel0000-0003-2823-782XKevenBluteauInstitute of Financial Analysis - University of Neuchâtel10.21105/joss.00172https://doi.org/10.5281/zenodo.268594R, C++https://joss.theoj.org/papers/10.21105/joss.00172.pdfnse, numerical standard error, simulation, MCMC, HAC, bootstrap