JOSS Papers: Microscopy

All Papers
1885
 Published Papers
1673
 Active Papers
212
published Published 3 months ago

PWSpy: A Python library dedicated to the analysis of Partial Wave Spectroscopic Microscopy data.

Python Batchfile MATLAB
@nanthony21
10.21105/joss.03957
published Published 3 months ago

PiSCAT: A Python Package for Interferometric Scattering Microscopy

@po60nani
10.21105/joss.04024
published Published 11 months ago

ImSwitch: Generalizing microscope control in Python

Python
@kasasxav
10.21105/joss.03394
published Published about 1 year ago

starfish: scalable pipelines for image-based transcriptomics

Jupyter Notebook Python wdl
@neuromusic
10.21105/joss.02440
published Published about 1 year ago

fastPLI: A Fiber Architecture Simulation Toolbox for 3D-PLI

Python C++
@fmatuschke
10.21105/joss.03042
published Published over 1 year ago

Cellocity: A Python package for analysis of confluent cell layer dynamics

Python
@oftatkofta
10.21105/joss.02818
published Published over 1 year ago

SLIX: A Python package for fully automated evaluation of Scattered Light Imaging measurements on brain tissue

Python
@Thyre
10.21105/joss.02675
published Published over 1 year ago

BrainGlobe Atlas API: a common interface for neuroanatomical atlases

Python Jupyter Notebook
@adamltyson
10.21105/joss.02668
published Published about 2 years ago

LiberTEM: Software platform for scalable multidimensional data processing in transmission electron microscopy

C Python Scala
@uellue
10.21105/joss.02006
published Published over 2 years ago

ExTemp: A computational and image-processing suite for extracting temporal barcodes

Matlab
@shalinshah1993
10.21105/joss.02026
Displaying all 10 papers

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ISSN 2475-9066