tag:joss.theoj.org,2005:/papers/tagged/GitLabJournal of Open Source Software2020-09-02T00:00:00ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/15772020-09-02T00:00:00Z2022-08-25T16:35:40ZUtopia: A Comprehensive and Collaborative Modeling Framework for Complex and Evolving Systemsacceptedlatest2020-03-07 19:20:06 UTC532020-09-02 00:00:00 UTC520202165LukasRiedelInstitute of Environmental Physics, Heidelberg University, Germany, Interdisciplinary Center for Scientific Computing, Heidelberg University, Germany, Heidelberg Graduate School of Mathematical and Computational Methods for the Sciences, Heidelberg University, Germany0000-0002-4667-3652BenjaminHerdeanuInstitute of Environmental Physics, Heidelberg University, Germany, Heidelberg Graduate School for Physics, Heidelberg University, Germany0000-0001-6343-3004HaraldMackInstitute of Environmental Physics, Heidelberg University, Germany0000-0001-7787-9496YunusSevinchanInstitute of Environmental Physics, Heidelberg University, Germany0000-0003-3858-0904JulianWeningerDepartment of Biochemistry, University of Geneva, Switzerland10.21105/joss.02165https://doi.org/10.5281/zenodo.4011979C++, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02165.pdfComplex Systems, Agent-based Models, Modeling Framework, Computational Science, Docker, GitLab, HDF5, YAMLtag:joss.theoj.org,2005:Paper/14472020-01-23T15:03:14Z2021-02-15T11:31:07Zoutsider: Install and run programs, outside of R, inside of Racceptedv0.1.12020-01-21 10:58:32 UTC452020-01-23 15:03:14 UTC520202038DominicJ.BennettGothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden0000-0003-2722-1359HannesHettlingNaturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands0000-0003-4144-2238DanieleSilvestroGothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden0000-0003-0100-0961RutgerVosNaturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands0000-0001-9254-7318AlexandreAntonelliGothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden, Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK0000-0003-1842-929710.21105/joss.02038https://doi.org/10.5281/zenodo.3615177Rhttps://joss.theoj.org/papers/10.21105/joss.02038.pdfDocker, GitHub, GitLab, BitBucket, Reproducibility, Workflow, Integration