JOSS Papers: Genomics

All Papers
2414
 Published Papers
2169
 Active Papers
245
published Published about 3 years ago

Chromatiblock: scalable whole-genome visualization of structural differences in prokaryotes

Python
@mjsull
10.21105/joss.02451
published Published about 3 years ago

graphsim: An R package for simulating gene expression data from graph structures of biological pathways

R Ruby
@TomKellyGenetics
10.21105/joss.02161
published Published over 3 years ago

LTRpred: de novo annotation of intact retrotransposons

R UnrealScript
@HajkD
10.21105/joss.02170
published Published over 3 years ago

Recan: Python tool for analysis of recombination events in viral genomes

Python
@babinyurii
10.21105/joss.02014
published Published over 3 years ago

covtobed: a simple and fast tool to extract coverage tracks from BAM files

C++
@telatin
10.21105/joss.02119
published Published over 3 years ago

fqfa: A pure Python package for genomic sequence files

Python
@afrubin
10.21105/joss.02076
published Published over 3 years ago

FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets

Python
@tkchafin
10.21105/joss.02030
published Published over 3 years ago

ReferenceSeeker: rapid determination of appropriate reference genomes

Python
@oschwengers
10.21105/joss.01994
published Published over 3 years ago

NCBImeta: efficient and comprehensive metadata retrieval from NCBI databases

Python
@ktmeaton
10.21105/joss.01990
published Published almost 4 years ago

alignparse: A Python package for parsing complex features from high-throughput long-read sequencing

Python Jupyter Notebook
@jbloom
10.21105/joss.01915
Displaying papers 21 - 30 of 55 in total

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ISSN 2475-9066