JOSS Papers: Genomics

Published Papers

published Published about 1 month ago

<code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences

Python Jupyter Notebook

10.21105/joss.07765

published Published 6 months ago

delfies: a Python package for the detection of DNA breakpoints with neo-telomere addition

Python

10.21105/joss.07385

published Published 7 months ago

Mashpit: sketching out genomic epidemiology

Python

10.21105/joss.07306

published Published 7 months ago

pyPLNmodels: A Python package to analyze multivariate high-dimensional count data

Jupyter Notebook Python R

10.21105/joss.06969

published Published 9 months ago

Binette: a fast and accurate bin refinement tool to construct high quality Metagenome Assembled Genomes.

Python

10.21105/joss.06782

published Published 10 months ago

Back to sequences: Find the origin of k-mers

Python Rust

@pierrepeterlongo

10.21105/joss.07066

published Published 10 months ago

primerForge: a Python program for identifying primer pairs capable of distinguishing groups of genomes from each other

Python

10.21105/joss.06850

published Published about 1 year ago

sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets

Python Nix C

10.21105/joss.06830

published Published about 1 year ago

HARE: A Python workflow for analyzing genomic feature enrichment in GWAS datasets

Python

10.21105/joss.06359

published Published over 1 year ago

Syn-CpG-Spacer: A Panel web app for synonymous recoding of viral genomes with CpG dinucleotides

Python

10.21105/joss.06332

Displaying papers 1 - 10 of 74 in total

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