published Published 14 days ago
PileupCaller: A command-line tool to sample genotypes from low-coverage sequencing data of ancient DNA
Haskell D Python
@stschiff
@keshav-gandhi
published Published 2 months ago
perbase: A performant per-base sequencing metrics toolkit with accurate handling of complex alignments
Python Rust
@sstadick
@pierrepeterlongo
published Published over 2 years ago
cstag and cstag-cli: tools for manipulating and visualizing cs tags
Python
@akikuno
published Published over 2 years ago
QuaC: A Pipeline Implementing Quality Control Best Practices for Genome Sequencing and Exome Sequencing Data
Jinja Python
@ManavalanG
published Published over 2 years ago
Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance
Python Nextflow
@jhayer
published Published over 3 years ago
btllib: A C++ library with Python interface for efficient genomic sequence processing
Python C R
@vlad0x00
published Published over 3 years ago
VPsearch: fast exact sequence similarity search for genomic sequences
Python Cython C++
@jvkersch
published Published about 4 years ago
@alex2cris
