JOSS Papers: Epidemiology

Published Papers

published Published 2 months ago

simulist: An R package to simulate disease outbreak line list and contacts data

R

10.21105/joss.08781

published Published 3 months ago

conmat: generate synthetic contact matrices for a given age-stratified population

R Lua JavaScript

10.21105/joss.08326

published Published 6 months ago

An R Package for Acquiring and Processing Notifiable Infectious Diseases Dataset from the Japan Institute for Health Security

R Rez

10.21105/joss.08577

published Published 8 months ago

omock: A R package for Mock Data Generation for the Observational Medical Outcomes Partnership Common Data Model

R

10.21105/joss.08178

published Published over 1 year ago

Mashpit: sketching out genomic epidemiology

Python

10.21105/joss.07306

published Published over 1 year ago

primerForge: a Python program for identifying primer pairs capable of distinguishing groups of genomes from each other

Python

10.21105/joss.06850

published Published almost 2 years ago

MetaCast: A package for broadCASTing epidemiological and ecological models over META-populations.

Python Jupyter Notebook

10.21105/joss.06851

published Published almost 2 years ago

ddtlcm: An R package for overcoming weak separation in Bayesian latent class analysis via tree-regularization

R

10.21105/joss.06220

published Published almost 2 years ago

dataquieR 2: An updated R package for FAIR data quality assessments in observational studies and electronic health record data

R JavaScript

10.21105/joss.06581

published Published over 3 years ago

localcovid19now: processing and mapping COVID-19 case data at subnational scales

R Vim Snippet

10.21105/joss.04898

Displaying papers 1 - 10 of 23 in total

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