tag:joss.theoj.org,2005:/papers/tagged/DRAMJournal of Open Source Software2022-06-01T20:05:57ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/35112022-06-01T20:05:57Z2022-06-02T00:01:04Zsam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment filesacceptedv1.0.0b2022-04-21 15:14:38 UTC742022-06-01 20:05:57 UTC720224360MaximeBorryMicrobiome Sciences Group, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Leipzig, Germany0000-0001-9140-7559AlexanderHübnerMicrobiome Sciences Group, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Leipzig, Germany, Faculty of Biological Sciences, Friedrich-Schiller Universität Jena, Jena, Germany0000-0003-3572-9996ChristinaWarinnerMicrobiome Sciences Group, Max Planck Institute for Evolutionary Anthropology, Department of Archaeogenetics, Leipzig, Germany, Faculty of Biological Sciences, Friedrich-Schiller Universität Jena, Jena, Germany, Department of Anthropology, Harvard University, Cambridge, MA, United States of America0000-0002-4528-587710.21105/joss.04360https://doi.org/10.5281/zenodo.6585307Pythonhttps://joss.theoj.org/papers/10.21105/joss.04360.pdfmetagenomics, microbiome, alignment, sam, bam, cram, htslib, taxonomy, LCA, ancestortag:joss.theoj.org,2005:Paper/20472021-05-13T13:24:09Z2021-05-20T20:10:30ZParaMonte: A high-performance serial/parallel Monte Carlo simulation library for C, C++, Fortranacceptedv1.2.02020-09-29 21:20:03 UTC612021-05-13 13:24:09 UTC620212741AmirShahmoradiDepartment of Physics, The University of Texas, Arlington, TX, Data Science Program, The University of Texas, Arlington, TX0000-0002-9720-8937FatemehBagheriDepartment of Physics, The University of Texas, Arlington, TX10.21105/joss.02741https://doi.org/10.5281/zenodo.4749957Python, Fortranhttps://joss.theoj.org/papers/10.21105/joss.02741.pdfC, C++, Monte Carlo, Markov Chain Monte Carlo, Uncertainty Quantification, Metropolis-Hastings, adaptive sampling, MCMC, DRAMtag:joss.theoj.org,2005:Paper/12722020-07-20T20:17:00Z2021-02-15T11:31:33Zpylustrator: code generation for reproducible figures for publicationacceptedv0.12.02019-10-04 08:52:20 UTC512020-07-20 20:17:00 UTC520201989RichardGerumDepartment of Physics, University of Erlangen-Nürnberg, Germany0000-0001-5893-265010.21105/joss.01989https://doi.org/10.5281/zenodo.3952417Pythonhttps://joss.theoj.org/papers/10.21105/joss.01989.pdfreproducibility, code generation, interactive, matplotlib, plotting, drag, styletag:joss.theoj.org,2005:Paper/9712019-06-06T19:27:16Z2021-02-15T11:32:16Zpymcmcstat: A Python Package for Bayesian Inference Using Delayed Rejection Adaptive Metropolisacceptedv1.7.02019-04-22 19:29:58 UTC382019-06-06 19:27:16 UTC420191417PaulR.MilesDepartment of Mathematics, North Carolina State University0000-0002-7501-511410.21105/joss.01417https://doi.org/10.5281/zenodo.2660145Python, Jupyter Notebook, C++https://joss.theoj.org/papers/10.21105/joss.01417.pdfMCMC, DRAM, Bayesian Inferencetag:joss.theoj.org,2005:Paper/5992019-01-20T23:32:52Z2021-02-15T11:33:04Zeights: BS 8888:2011 first angle projection drawings from FreeCAD 3D modelaccepted0.02018-08-20 20:16:51 UTC332019-01-20 23:32:52 UTC42019974DanielC.HattonLecturer in Mechanical and Marine Engineering, Autonomous Marine Systems Group, School of Engineering, University of Plymouth0000-0002-4585-333610.21105/joss.00974https://doi.org/10.5281/zenodo.2531603Pythonhttps://joss.theoj.org/papers/10.21105/joss.00974.pdfcomputer aided design, engineering drawings, standards compliancetag:joss.theoj.org,2005:Paper/1972018-09-04T19:15:41Z2021-02-15T11:34:08ZWindrose: A Python Matplotlib, Numpy library to manage wind and pollution data, draw windroseaccepted1.62017-05-16 09:30:54 UTC292018-09-04 19:15:41 UTC32018268LionelRoubeyrieLIMAIR0000-0001-6017-4385SébastienCellesUniversité de Poitiers - IUT de Poitiers (Poitiers Institute of Technology)0000-0001-9987-433810.21105/joss.00268https://doi.org/10.5281/zenodo.1406384Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.00268.pdfwindrose, windspeed, wind, speed, plot, python, matplotlib, numpy, pandas