JOSS Papers: Bioinformatics

All Papers
1824
 Published Papers
1636
 Active Papers
188
published Published 26 days ago

Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes

Python C Cython
@althonos
10.21105/joss.04296
published Published 2 months ago

Rainbow: Automated Air-Liquid Interface Cell Culture Analysis Using Deep Optical Flow

Python Jupyter Notebook
@AlphonsG
10.21105/joss.04080
published Published 4 months ago

Rasusa: Randomly subsample sequencing reads to a specified coverage

Rust
@mbhall88
10.21105/joss.03941
published Published 6 months ago

BioProv - A provenance library for bioinformatics workflows

Python
@vinisalazar
10.21105/joss.03622
published Published 7 months ago

Opfi: A Python package for identifying gene clusters in large genomics and metagenomics data sets

Python Jupyter Notebook
@alexismhill3
10.21105/joss.03678
published Published 11 months ago

Bacting: a next generation, command line version of Bioclipse

Java
@egonw
10.21105/joss.02558
published Published about 1 year ago

OpenOmics: A bioinformatics API to integrate multi-omics datasets and interface with public databases.

Python
@JonnyTran
10.21105/joss.03249
published Published about 1 year ago

REGENS: an open source Python package for simulating realistic autosomal genotypes

Python
@greggj2016
10.21105/joss.02743
published Published over 1 year ago

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens

Python Perl
@huddlej
10.21105/joss.02906
published Published over 1 year ago

Chromatiblock: scalable whole-genome visualization of structural differences in prokaryotes

Python
@mjsull
10.21105/joss.02451
Displaying papers 1 - 10 of 58 in total

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ISSN 2475-9066