tag:joss.theoj.org,2005:/papers/tagged/Active%20particlesJournal of Open Source Software2020-06-30T13:37:43ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/17152020-06-30T13:37:43Z2021-02-15T11:30:33ZPyStokes: phoresis and Stokesian hydrodynamics in Pythonacceptedv2.1.12020-06-06 23:51:42 UTC502020-06-30 13:37:43 UTC520202318RajeshSinghDAMTP, Centre for Mathematical Sciences, University of Cambridge, Wilberforce Road, Cambridge CB3 0WA, UK0000-0003-0266-9691RonojoyAdhikariDAMTP, Centre for Mathematical Sciences, University of Cambridge, Wilberforce Road, Cambridge CB3 0WA, UK10.21105/joss.02318https://doi.org/10.5281/zenodo.3923867Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02318.pdfCython, Active particles, Stokes flow, Hydrodynamic interactions, Phoretic interactionstag:joss.theoj.org,2005:Paper/7212019-02-19T02:29:11Z2021-02-15T11:32:49ZIDTxl: The Information Dynamics Toolkit xl: a Python package for the efficient analysis of multivariate information dynamics in networksacceptedv.0.4.02018-11-11 16:41:12 UTC342019-02-19 02:29:11 UTC420191081PatriciaWollstadtMEG Unit, Brain Imaging Center, Goethe-University Frankfurt, Fankfurt am Main, Germany0000-0002-7105-5207JosephT.LizierCentre for Complex Systems, Faculty of Engineering and IT, The University of Sydney, Sydney, Australia0000-0002-9910-8972RaulVicenteComputational Neuroscience Lab, Institute of Computer Science, Tartu, Estonia0000-0002-7894-6213ConorFinnCentre for Complex Systems, Faculty of Engineering and IT, The University of Sydney, Sydney, Australia, Data61, CSIRO, Epping, Australia0000-0001-8542-4205MarioMartinez-ZarzuelaCommunications and Signal Theory and Telematics Engineering, University of Valladolid, Valladolid, Spain0000-0002-6866-3316PedroMedianoComputational Neurodynamics Group, Department of Computing, Imperial College London, London, United Kingdom0000-0003-1789-5894LeonardoNovelliCentre for Complex Systems, Faculty of Engineering and IT, The University of Sydney, Sydney, Australia0000-0002-6081-3367MichaelWibralMEG Unit, Brain Imaging Center, Goethe-University Frankfurt, Fankfurt am Main, Germany, Max Planck Institute for Dynamics and Self-Organization, Göttingen, Germany, Campus Institute for Dynamics of Biological Networks, Georg-August Universität, Göttingen, Germany0000-0001-8010-586210.21105/joss.01081https://doi.org/10.5281/zenodo.2554339Python, C, Matlab, Cudahttps://joss.theoj.org/papers/10.21105/joss.01081.pdfinformation theory, network inference, multivariate transfer entropy, mutual information, active information storage, partial information decomposition