tag:joss.theoj.org,2005:/papers/reviewed_by/@rougierJournal of Open Source Software2022-07-04T16:37:30ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/31512022-07-04T16:37:30Z2022-07-05T00:00:36ZNeuralFieldEq.jl: A flexible solver to compute Neural Field Equations in several scenariosacceptedv0.1.22021-11-02 22:16:16 UTC752022-07-04 16:37:30 UTC720223974TiagoSequeiraInstituto Superior Técnico - University of Lisbon0000-0001-8579-367610.21105/joss.03974https://doi.org/10.5281/zenodo.6226695Juliahttps://joss.theoj.org/papers/10.21105/joss.03974.pdfComputational Neuroscience, Neural Field Equations, Stochastic Processes, Delayed Equations, Fast Fourier Transformstag:joss.theoj.org,2005:Paper/25582021-08-04T22:32:12Z2021-08-05T00:02:46ZFURY: advanced scientific visualizationacceptedmaster2021-04-08 17:33:10 UTC642021-08-04 22:32:12 UTC620213384EleftheriosGaryfallidisDepartment of Intelligent Systems Engineering, Luddy School of Informatics, Computing and Engineering, Indiana University, Bloomington, IN, USA0000-0002-3991-2774SergeKoudoroDepartment of Intelligent Systems Engineering, Luddy School of Informatics, Computing and Engineering, Indiana University, Bloomington, IN, USA0000-0002-9819-9884JavierGuajeDepartment of Intelligent Systems Engineering, Luddy School of Informatics, Computing and Engineering, Indiana University, Bloomington, IN, USA0000-0003-3534-3794Marc-AlexCôtéMicrosoft Research, Montreal, Canada0000-0002-5147-7859SohamBiswasDepartment of Computer Science and Engineering, Institute of Engineering and Management, Kolkata, India0000-0002-8449-2107DavidReaganAdvanced Visualization Lab, University Information Technology Services, Indiana University, Bloomington, IN, USA0000-0002-8359-7580NasimAnoushehDepartment of Intelligent Systems Engineering, Luddy School of Informatics, Computing and Engineering, Indiana University, Bloomington, IN, USA0000-0002-5931-7753FilipiSilvaNetwork Science Institute, Indiana University, Bloomington, IN, USA0000-0002-9151-6517GeoffreyFoxDepartment of Intelligent Systems Engineering, Luddy School of Informatics, Computing and Engineering, Indiana University, Bloomington, IN, USA0000-0003-1017-1391FuryContributorsAnywhere in the Universe10.21105/joss.03384https://doi.org/10.5281/zenodo.5160945PowerShell, Python, GLSLhttps://joss.theoj.org/papers/10.21105/joss.03384.pdfscientific visualization, 3D rendering, Shaders, Vulkantag:joss.theoj.org,2005:Paper/23652021-02-24T17:21:47Z2021-02-25T00:01:38ZGroupyr: Sparse Group Lasso in Pythonacceptedv0.2.02021-02-01 13:31:54 UTC582021-02-24 17:21:47 UTC620213024AdamRichie-HalfordeScience Institute, University of Washington0000-0001-9276-9084ManjariNarayanDepartment of Psychiatry and Behavioral Sciences, Stanford University0000-0001-5348-270XNoahSimonDepartment of Biostatistics, University of Washington0000-0002-8985-2474JasonYeatmanGraduate School of Education and Division of Developmental and Behavioral Pediatrics, Stanford University0000-0002-2686-1293ArielRokemDepartment of Psychology, University of Washington0000-0003-0679-198510.21105/joss.03024https://doi.org/10.5281/zenodo.4559599Pythonhttps://joss.theoj.org/papers/10.21105/joss.03024.pdfgroup lasso, penalized regression, classificationtag:joss.theoj.org,2005:Paper/20162020-10-25T18:19:36Z2021-02-15T11:29:59Zpd-parser: A tool for Matching Photodiode Deflection Events to Time-Stamped Eventsaccepted0.12020-09-07 15:07:47 UTC542020-10-25 18:19:36 UTC520202674AlexanderP.Rockhill,University of Oregon, Department of Human Physiology, Eugene, Oregon.0000-0003-3868-7453AhmedM.RaslanDepartment of Neurological Surgery, Oregon Health & Science University, Portland, Oregon.0000-0002-8421-7105NicoleC.SwannUniversity of Oregon, Department of Human Physiology, Eugene, Oregon.0000-0003-2463-513410.21105/joss.02674https://doi.org/10.5281/zenodo.4122049Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.02674.pdfneuroscience, electrophysiology, psychology, behaviortag:joss.theoj.org,2005:Paper/9732019-10-28T12:10:10Z2021-02-15T11:32:15ZDEEPaaS API: a REST API for Machine Learning and Deep Learning modelsaccepted0.3.02019-04-23 12:07:03 UTC422019-10-28 12:10:10 UTC420191517ÁlvaroLópez GarcíaInstitute of Physics of Cantabria (IFCA), Spanish National Research Council (CSIC) and University of Cantabria (UC)0000-0002-9160-510610.21105/joss.01517https://doi.org/10.5281/zenodo.3519350Pythonhttps://joss.theoj.org/papers/10.21105/joss.01517.pdfapi, rest, serverless, faas, deep learning, machine learning, pythontag:joss.theoj.org,2005:Paper/10932019-10-01T23:48:40Z2021-02-15T11:31:59Zneurone_loader: A Python module for loading EEG data recorded with Bittium NeurOneacceptedv1.1.02019-07-06 17:10:38 UTC422019-10-01 23:48:40 UTC420191626FelixA.HeilmeyerTranslational Neurotechnology Lab, Department of Neurosurgery, University of Freiburg–Medical Center, Freiburg im Breisgau, Germany0000-0002-9068-2679TonioBallTranslational Neurotechnology Lab, Department of Neurosurgery, University of Freiburg–Medical Center, Freiburg im Breisgau, Germany10.21105/joss.01626https://doi.org/10.5281/zenodo.3468534Pythonhttps://joss.theoj.org/papers/10.21105/joss.01626.pdfneuroscience, neurophysiology, healthcare, EEG, file formatstag:joss.theoj.org,2005:Paper/8022019-03-31T19:24:15Z2021-02-15T11:32:41ZLightTwinSVM: A Simple and Fast Implementation of Standard Twin Support Vector Machine Classifieracceptedv0.5.02019-01-05 08:20:14 UTC352019-03-31 19:24:15 UTC420191252AmirM.MirIranian Research Institute for Information Science and Technology (IranDoc), Tehran, Iran0000-0002-9818-7752JalalA.NasiriIranian Research Institute for Information Science and Technology (IranDoc), Tehran, Iran0000-0003-1821-503710.21105/joss.01252https://doi.org/10.5281/zenodo.2619436Python, C++, PowerShellhttps://joss.theoj.org/papers/10.21105/joss.01252.pdfTwinSVM, classification, machine learning, Implementationtag:joss.theoj.org,2005:Paper/6042018-10-02T19:49:45Z2021-02-15T11:33:04Zgraynet: single-subject morphometric networks for neuroscience connectivity applicationsacceptedv0.3.92018-08-25 04:38:22 UTC302018-10-02 19:49:45 UTC32018924PradeepReddyRaamanaRotman Research Institute, Baycrest Health Sciences, Toronto, ON, Canada0000-0003-4662-0558StephenC.StrotherRotman Research Institute, Baycrest Health Sciences, Toronto, ON, Canada, Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada0000-0002-3198-217X10.21105/joss.00924https://doi.org/10.5281/zenodo.1442846Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.00924.pdfneuroscience, network, morphometry, connectivity, gray matter, graph, histogram, freesurfertag:joss.theoj.org,2005:Paper/5462018-09-01T12:33:33Z2021-02-15T11:33:13ZGEM: A Python package for graph embedding methodsacceptedv1.0.02018-07-09 19:14:11 UTC292018-09-01 12:33:33 UTC32018876PalashGoyalUSC Information Sciences Institute0000-0003-2455-2160EmilioFerraraUSC Information Sciences Institute0000-0002-1942-283110.21105/joss.00876https://doi.org/10.5281/zenodo.1407178C++, Pythonhttps://joss.theoj.org/papers/10.21105/joss.00876.pdfnetworks, graphs, embedding, graph embedding, network analysis, graph visualizationtag:joss.theoj.org,2005:Paper/4852018-06-20T11:10:10Z2021-02-15T11:33:24ZHelpMe Command Line Helper Utilityaccepted0.0.22018-04-30 14:58:33 UTC262018-06-20 11:10:10 UTC32018775VanessaSochatStanford University Research Computing0000-0002-4387-381910.21105/joss.00775https://doi.org/10.5281/zenodo.1293062Pythonhttps://joss.theoj.org/papers/10.21105/joss.00775.pdfDocker, github, uservoice, support, hpc, computing