tag:joss.theoj.org,2005:/papers/reviewed_by/@aznetoJournal of Open Source Software2019-03-01T14:33:49ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/6582019-03-01T14:33:49Z2021-02-15T11:32:54ZTipToft: detecting plasmids contained in uncorrected long read sequencing dataacceptedv0.1.42018-10-09 10:49:56 UTC352019-03-01 14:33:49 UTC420191021AndrewJ.PageQuadram Institute Bioscience, Norwich Research Park, Norwich, UK.0000-0001-6919-6062TorstenSeemannMelbourne Bioinformatics, The University of Melbourne, Parkville, Australia.0000-0001-6046-610X10.21105/joss.01021https://doi.org/10.5281/zenodo.2561192Pythonhttps://joss.theoj.org/papers/10.21105/joss.01021.pdfbioinformatics, plasmid typing, long read sequencing, bacteriatag:joss.theoj.org,2005:Paper/7332019-01-25T13:35:55Z2021-02-15T11:32:47Zsierra-local: A lightweight standalone application for drug resistance predictionacceptedv0.1.22018-11-26 16:18:15 UTC332019-01-25 13:35:55 UTC420191186JasperC.HoDepartment of Pathology and Laboratory Medicine, Western University, London, ON, Canada0000-0003-0693-8940GarwayT.NgDepartment of Pathology and Laboratory Medicine, Western University, London, ON, CanadaMathiasRenaudDepartment of Pathology and Laboratory Medicine, Western University, London, ON, CanadaArtF. y.PoonDepartment of Pathology and Laboratory Medicine, Western University, London, ON, Canada, Department of Microbiology and Immunology, Western University, London, ON, Canada, Department of Applied Mathematics, Western University, London, ON, Canada0000-0003-3779-154X10.21105/joss.01186https://doi.org/10.5281/zenodo.2548745Python, Rhttps://joss.theoj.org/papers/10.21105/joss.01186.pdfbioinformatics, HIV/AIDS, drug resistance, sequence analysis, clinical virology