tag:joss.theoj.org,2005:/papers/reviewed_by/@amoebaJournal of Open Source Software2024-01-29T16:38:15ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/42112024-01-29T16:38:15Z2024-01-30T08:20:19ZChitin Builder: a VMD tool for the generation of structures of chitin molecular crystals for atomistic simulationsaccepted1.02023-02-15 16:12:05 UTC932024-01-29 16:38:15 UTC920245771DavidMalaspinaInstitut de Ciencia de Materials de Barcelona (ICMAB-CSIC),Campus UAB Bellaterra, Barcelona, Spain0000-0002-5420-9534JordiFaraudoInstitut de Ciencia de Materials de Barcelona (ICMAB-CSIC),Campus UAB Bellaterra, Barcelona, Spain0000-0002-6315-499310.21105/joss.05771https://doi.org/10.5281/zenodo.3274725Tcl, Rich Text Formathttps://joss.theoj.org/papers/10.21105/joss.05771.pdfVMD, chitin polymer structure, molecular dynamics, tcltag:joss.theoj.org,2005:Paper/39282023-02-03T08:46:33Z2023-02-04T00:00:42ZRCaNmodel: An R package for Chance and Necessity modellingacceptedv2.02022-09-27 09:08:34 UTC822023-02-03 08:46:33 UTC820234955HilaireDrouineauINRAE, UR EABX, 50 avenue de Verdun, CEDEX, 33612 Cestas, France0000-0001-9206-0040BenjaminPlanqueInstitute of Marine Research, Norway, P.O. Box 6606, 9296 Tromsø, Norway0000-0002-0557-7410ChristianMullonIRD, UMR MARBEC, Avenue Jean Monnet, Sete, France0000-0003-3990-911810.21105/joss.04955https://doi.org/10.5281/zenodo.7595076Java, JavaScript, R, C++https://joss.theoj.org/papers/10.21105/joss.04955.pdftrophic food web model, javafx, trophic controls, linear inverse modellingtag:joss.theoj.org,2005:Paper/23832021-04-14T17:07:27Z2021-04-15T23:51:02Zpresize: An R-package for precision-based sample size calculation in clinical researchaccepted0.1.32021-02-10 15:40:49 UTC602021-04-14 17:07:27 UTC620213118AlanG.HaynesCTU Bern, University of Bern, Bern, Switzerland, Statistics and Methodology Platform of the Swiss Clinical Trial Organisation (SCTO), Bern, Switzerland0000-0003-1374-081XArmandoLenzCTU Bern, University of Bern, Bern, Switzerland, Statistics and Methodology Platform of the Swiss Clinical Trial Organisation (SCTO), Bern, Switzerland0000-0001-5888-0846OdileStalderCTU Bern, University of Bern, Bern, Switzerland, Statistics and Methodology Platform of the Swiss Clinical Trial Organisation (SCTO), Bern, Switzerland0000-0002-5563-2975AndreasLimacherCTU Bern, University of Bern, Bern, Switzerland, Statistics and Methodology Platform of the Swiss Clinical Trial Organisation (SCTO), Bern, Switzerland0000-0002-9094-947610.21105/joss.03118https://doi.org/10.5281/zenodo.4680282Rhttps://joss.theoj.org/papers/10.21105/joss.03118.pdfR software, clinical trials, sample size calculationtag:joss.theoj.org,2005:Paper/18662020-09-05T14:14:32Z2021-02-15T11:30:15ZSeroTools: a Python package for Salmonella serotype data analysisacceptedv0.2.02020-07-20 19:14:52 UTC532020-09-05 14:14:32 UTC520202556JosephD.Baugher,Center for Food Safety and Applied Nutrition, U.S. Food and Drug Administration0000-0003-2466-304710.21105/joss.02556https://doi.org/10.5281/zenodo.4015335Pythonhttps://joss.theoj.org/papers/10.21105/joss.02556.pdfSalmonella, serotype, serovar, White-Kauffmann-Le Minor, bioinformaticstag:joss.theoj.org,2005:Paper/12712019-12-08T12:11:31Z2021-02-15T11:31:33Zperccalc: An R package for estimating percentiles from categorical variablesacceptedv1.0.42019-10-03 12:52:32 UTC442019-12-08 12:11:31 UTC420191796JorgeCimentadaLaboratory of Digital and Computational Demography, Max Planck Institute of Demographic Research (MPIDR)0000-0001-5594-115610.21105/joss.01796https://doi.org/10.5281/zenodo.3559855Rhttps://joss.theoj.org/papers/10.21105/joss.01796.pdfcategorical data analysis, achievement gapstag:joss.theoj.org,2005:Paper/5602019-04-02T09:29:18Z2021-02-15T11:33:11ZTraitDB: Web application database of phenotypic trait data.acceptedv0.9.12018-07-20 15:46:05 UTC362019-04-02 09:29:18 UTC420191201DanLeehrNational Evolutionary Synthesis Center0000-0003-3221-9579MercedesGosbyNational Evolutionary Synthesis Center10.21105/joss.01201https://doi.org/10.5281/zenodo.2609163Ruby, CoffeeScript, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.01201.pdftrait, rails, csvtag:joss.theoj.org,2005:Paper/6572018-12-10T11:25:37Z2021-02-15T11:32:54Zwolfexplorer: a tool for visualization and exploration of complex multi-year multi-specimen datasetsacceptedv0.92018-10-09 08:01:53 UTC322018-12-10 11:25:37 UTC320181064RomanLuštrikGenialis, Inc.0000-0002-1410-8253ŽanKuraltBiotechnical faculty, University of Ljubljana, Jamnikarjeva 101, SI-1000 Ljubljana, Slovenia0000-0001-7201-428210.21105/joss.01064https://doi.org/10.5281/zenodo.1890358Rhttps://joss.theoj.org/papers/10.21105/joss.01064.pdfspatio-temporal genetic data, shinydasboardtag:joss.theoj.org,2005:Paper/1972018-09-04T19:15:41Z2021-02-15T11:34:08ZWindrose: A Python Matplotlib, Numpy library to manage wind and pollution data, draw windroseaccepted1.62017-05-16 09:30:54 UTC292018-09-04 19:15:41 UTC32018268LionelRoubeyrieLIMAIR0000-0001-6017-4385SébastienCellesUniversité de Poitiers - IUT de Poitiers (Poitiers Institute of Technology)0000-0001-9987-433810.21105/joss.00268https://doi.org/10.5281/zenodo.1406384Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.00268.pdfwindrose, windspeed, wind, speed, plot, python, matplotlib, numpy, pandastag:joss.theoj.org,2005:Paper/3032017-11-15T00:00:00Z2021-02-15T11:33:50ZRetriever: Data Retrieval Toolacceptedv2.1.02017-11-04 01:52:33 UTC192017-11-15 00:00:00 UTC22017451HenrySenyondoDepartment of Wildlife Ecology and Conservation, University of Florida0000-0001-7105-5808BenjaminD.MorrisNone0000-0003-4418-1360AkashGoelDelhi Technological University, Delhi0000-0001-9878-0401AndrewZhangThe University of Florida0000-0003-1148-7734AkshayNarasimhaBirla Institute of Technology and Science, Pilani0000-0002-3901-2610ShivamNegiManipal Institute of Technology, Manipal0000-0002-5637-0479DavidJ.HarrisThe University of Florida0000-0003-3332-9307DeborahGertrudeDiggesPES Institute of Technology, Bengaluru0000-0002-7840-5054KapilKumarNational Institute of Technology, Delhi0000-0002-2292-1033AmritanshuJainBirla Institute of Technology and Science, Pilani0000-0003-1187-7900KunalPalRWTH Aachen University, Aachen, Germany0000-0002-9657-0053KevinkumarAmiparaSardar Vallabhbhai National Institute of Technology, Surat0000-0001-5021-2018EthanP.WhiteDepartment of Wildlife Ecology and Conservation, University of Florida, Informatics Institute, University of Florida0000-0001-6728-774510.21105/joss.00451https://doi.org/10.5281/zenodo.1038272Python, Inno Setuphttps://joss.theoj.org/papers/10.21105/joss.00451.pdfdata retrieval, data processing, python, data, data science, datasetstag:joss.theoj.org,2005:Paper/2442017-08-27T00:00:00Z2021-02-15T11:34:00ZLcopt - An interactive tool for creating fully parameterised Life Cycle Assessment (LCA) foreground modelsacceptedv0.4.02017-07-24 18:01:16 UTC162017-08-27 00:00:00 UTC22017339PJamesJoyceKTH Royal Institute of Technology0000-0002-9560-313210.21105/joss.00339https://doi.org/10.5281/zenodo.848529Python, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.00339.pdfexample, tags, for the paper