tag:joss.theoj.org,2005:/papers/reviewed_by/@acolumJournal of Open Source Software2022-07-05T15:03:00ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/33362022-07-05T15:03:00Z2022-07-06T00:01:00Z`tukey_hsd`: An Accurate Implementation of the Tukey Honestly Significant Difference Test in Pythonaccepted1.8.02022-02-13 23:20:31 UTC752022-07-05 15:03:00 UTC720224383DominicChmielCalifornia Polytechnic State University, San Luis Obispo, USA0000-0003-2499-6693SamuelWallanCalifornia Polytechnic State University, San Luis Obispo, USA0000-0002-5952-8921MattHaberlandCalifornia Polytechnic State University, San Luis Obispo, USA0000-0003-4806-360110.21105/joss.04383https://doi.org/10.5281/zenodo.6781029Python, C, Fortran, Cythonhttps://joss.theoj.org/papers/10.21105/joss.04383.pdfSciPy, statistics, hypothesis testing, statistical distributionstag:joss.theoj.org,2005:Paper/31182022-02-14T13:56:48Z2022-02-17T23:07:39ZMetaWards: A flexible metapopulation framework for modelling disease spreadacceptedv1.6.12021-10-20 15:14:37 UTC702022-02-14 13:56:48 UTC720223914ChristopherWoodsResearch Software Engineering, Advanced Computing Research Centre, University of Bristol, UK0000-0001-6563-9903LesterHedgesResearch Software Engineering, Advanced Computing Research Centre, University of Bristol, UK0000-0002-5624-0500ChristopherEdsallResearch Software Engineering, Research Computing Services, University of Cambridge, UK0000-0001-6863-2184EllenBrooks-PollockDepartment of Engineering Mathematics, University of Bristol, UK0000-0002-5984-4932ChristopherParton-FentonCollege of Engineering, Mathematics and Physical Sciences, University of Exeter, UK0000-0003-0052-8430TrevelyanJ.McKinleyCollege of Medicine and Health, University of Exeter, UK0000-0002-9485-3236MattJ.KeelingZeeman Institute (SBIDER), University of Warwick, Coventry, UK0000-0003-4639-4765LeonDanonDepartment of Engineering Mathematics, University of Bristol, UK0000-0002-7076-187110.21105/joss.03914https://doi.org/10.5281/zenodo.5562738Python, Chttps://joss.theoj.org/papers/10.21105/joss.03914.pdfepidemiology, epidemics, sir-model, compartmental transmission model, covid, python, cythontag:joss.theoj.org,2005:Paper/11742019-12-20T14:37:33Z2021-02-15T11:31:44ZEoN (Epidemics on Networks): a fast, flexible Python package for simulation, analytic approximation, and analysis of epidemics on networksacceptedv1.0.82019-08-20 05:10:27 UTC442019-12-20 14:37:33 UTC420191731JoelC.MillerLa Trobe University, Melbourne, Australia, Institute for Disease Modeling, Seattle, Washington, USA0000-0003-4426-0405TonyTingInstitute for Disease Modeling, Seattle, Washington, USA10.21105/joss.01731https://doi.org/10.5281/zenodo.3572756Pythonhttps://joss.theoj.org/papers/10.21105/joss.01731.pdfSIR, SIS, Epidemic, Network, Stochastic simulationtag:joss.theoj.org,2005:Paper/12782019-11-05T18:24:44Z2021-02-15T11:31:32ZmodelStudio: Interactive Studio with Explanations for ML Predictive Modelsacceptedv0.1.82019-10-05 14:30:57 UTC432019-11-05 18:24:44 UTC420191798HubertBanieckiFaculty of Mathematics and Information Science, Warsaw University of Technology0000-0001-6661-5364PrzemyslawBiecekFaculty of Mathematics and Information Science, Warsaw University of Technology0000-0001-8423-182310.21105/joss.01798https://doi.org/10.5281/zenodo.3527770R, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.01798.pdfautomated data analysis, model visualization, explainable artificial intelligence, predictive modeling, interpretable machine learningtag:joss.theoj.org,2005:Paper/10172019-06-17T11:05:05Z2021-02-15T11:32:08ZDelira: A High-Level Framework for Deep Learning in Medical Image Analysisacceptedv0.3.22019-05-27 11:31:14 UTC382019-06-17 11:05:05 UTC420191488ChristophHaarburgerInstitute of Imaging and Computer Vision, RWTH Aachen University, GermanyJustusSchockInstitute of Imaging and Computer Vision, RWTH Aachen University, GermanyMichaelBaumgartnerInstitute of Imaging and Computer Vision, RWTH Aachen University, GermanyOliverRippelInstitute of Imaging and Computer Vision, RWTH Aachen University, GermanyDoritMerhofInstitute of Imaging and Computer Vision, RWTH Aachen University, Germany10.21105/joss.01488https://doi.org/10.5281/zenodo.3247307Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.01488.pdfpython, deep learning, medical image analysis, pytorch, tensorflowtag:joss.theoj.org,2005:Paper/8982019-05-31T17:40:33Z2021-02-15T11:32:30Ztsfeaturex: An R Package for Automating Time Series Feature Extractionacceptedv.0.3.62019-02-21 17:49:25 UTC372019-05-31 17:40:33 UTC420191279NelsonA.RoqueT32 Postdoctoral Fellow, Pennsylvania State University, Center for Healthy Aging, University Park, PA, USA0000-0003-1184-202XNilamRamProfessor, Pennsylvania State University, Human Development & Family Studies, University Park, PA, USA0000-0003-1671-525710.21105/joss.01279https://doi.org/10.5281/zenodo.3235466Rhttps://joss.theoj.org/papers/10.21105/joss.01279.pdftime series, dynamics, variability, intra-individual variabilitytag:joss.theoj.org,2005:Paper/7322019-01-07T15:21:45Z2021-02-15T11:32:47ZAnyPyTools: A Python package for reproducible research with the AnyBody Modeling Systemaccepted1.0.02018-11-26 14:47:04 UTC332019-01-07 15:21:45 UTC420191108MortenEnemarkLundAnyBody Technology A/S, Denmark, Department of Materials and Production, Aalborg University, Denmark0000-0001-9920-4051JohnRasmussenDepartment of Materials and Production, Aalborg University, Denmark0000-0003-3257-5653MichaelSkipperAndersenDepartment of Materials and Production, Aalborg University, Denmark0000-0001-8275-947210.21105/joss.01108https://doi.org/10.5281/zenodo.2450121Pythonhttps://joss.theoj.org/papers/10.21105/joss.01108.pdfMusculoskeletal Modeling, Batch processing, Parameter studies, Reproducible workflows, AnyBody Modeling Systemtag:joss.theoj.org,2005:Paper/7102018-12-16T22:28:55Z2021-02-15T11:32:51ZRule-based integration: An extensive system of symbolic integration rulesaccepted4.16.0.42018-10-29 07:47:05 UTC322018-12-16 22:28:55 UTC320181073AlbertRichIndependent researcher, co-author of the Derive computer algebra system0000-0002-0792-2775PatrickScheibeLeipzig University, Saxonian Incubator for Clinical Translation, Philipp-Rosenthal-Straße 55, 04103 Leipzig0000-0003-0361-9063NasserM.AbbasiUW-Madison, Madison, WI 53706, USA0000-0003-1333-154910.21105/joss.01073https://doi.org/10.5281/zenodo.2234522https://joss.theoj.org/papers/10.21105/joss.01073.pdfcomputer algebra system, calculus, integration, antiderivative, pattern matching, rewriting systems, reduction systems