tag:joss.theoj.org,2005:/papers/published?page=2Journal of Open Source Software2024-03-24T18:30:24ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/49572024-03-24T18:30:24Z2024-03-25T00:01:09ZSystems Neuro Browser (SNUB)accepted0.0.32023-11-25 17:21:43 UTC952024-03-24 18:30:24 UTC920246187CalebWeinrebDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, United States of America0000-0001-6100-6084MohammedAbdal MoniumOsmanDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, United States of America0000-0001-8606-6518MayaJayDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, United States of America0000-0001-5537-6476SandeepRobertDattaDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, United States of America0000-0002-8068-386210.21105/joss.06187https://doi.org/10.5281/zenodo.10825136Pythonhttps://joss.theoj.org/papers/10.21105/joss.06187.pdfneuroscience, animal behavior, graphical user interfacetag:joss.theoj.org,2005:Paper/44352024-03-24T14:42:39Z2024-03-25T00:01:12ZViable North Sea (ViNoS): A NetLogo Agent-based Model of German Small-scale Fisheriesaccepted1.0.02023-04-17 14:17:24 UTC952024-03-24 14:42:39 UTC920245731CarstenLemmenHelmholtz-Zentrum Hereon, Institute of Coastal Systems - Modeling and Analysis, Germany, carsten.lemmen@hereon.de0000-0003-3483-6036SaschaHokampUniversität Hamburg, Centre for Earth System Research and Sustainability (CEN), Germany0000-0002-2192-4013SerraÖreyHochschule Bremerhaven, Research Cluster Life Sciences, Bremerhaven, Germany0000-0003-3483-6036JürgenScheffranUniversität Hamburg, Centre for Earth System Research and Sustainability (CEN), Germany0000-0002-7171-306210.21105/joss.05731https://doi.org/10.5281/zenodo.7928199R, Schemehttps://joss.theoj.org/papers/10.21105/joss.05731.pdfNetLogo, Agent-based Model, ABM, North Sea, Fisheries, MuSSeL project, VIABLE, Plaice, Sole, Shrimptag:joss.theoj.org,2005:Paper/48192024-03-22T13:55:40Z2024-03-23T00:01:17Zcheckpoint_schedules: schedules for incremental checkpointing of adjoint simulationsacceptedv1.0.02023-09-28 08:06:01 UTC952024-03-22 13:55:40 UTC920246148DaianeI.DolciDepartment of Mathematics, Imperial College London, London, United Kingdom.0000-0002-1435-9538JamesR.MaddisonSchool of Mathematics and Maxwell Institute for Mathematical Sciences, The University of Edinburgh, United Kingdom.0000-0001-5742-4363DavidA.HamDepartment of Mathematics, Imperial College London, London, United Kingdom.0000-0001-9545-9110GuillaumePallezInria, University of Rennes, Rennes, France.0000-0001-8862-3277JulienHerrmannCNRS, IRIT, Université de Toulouse, Toulouse, France.0000-0003-4935-236810.21105/joss.06148https://doi.org/10.5281/zenodo.10817312Pythonhttps://joss.theoj.org/papers/10.21105/joss.06148.pdfCheckpointing methods, Adjoint-based gradienttag:joss.theoj.org,2005:Paper/49772024-03-21T10:50:32Z2024-03-24T15:46:26ZMRdataset : A unified and user-friendly interface to medical imaging datasetsaccepted0.332023-12-04 02:39:42 UTC952024-03-21 10:50:32 UTC920246269HarshSinhaIntelligent Systems Program, School of Computing and Information, University of Pittsburgh, United States of America0000-0002-8498-8559PradeepReddyRaamanaIntelligent Systems Program, School of Computing and Information, University of Pittsburgh, United States of America, Department of Biomedical Informatics, University of Pittsburgh, United States of America, Department of Radiology, University of Pittsburgh, United States of America0000-0003-4662-055810.21105/joss.06269https://doi.org/10.5281/zenodo.10805061Pythonhttps://joss.theoj.org/papers/10.21105/joss.06269.pdfneuroimagingtag:joss.theoj.org,2005:Paper/45062024-03-21T10:22:23Z2024-03-24T17:58:38ZAutomatic Computation for Robot Design (ACRoD): A Python package for numerical calculation of Jacobian of a robot at a given configuration around a specified end-effector pointacceptedv1.1.42023-05-24 15:07:03 UTC952024-03-21 10:22:23 UTC920245927AkkarapakamSuneeshJacobIndian Institute of Technology Kanpur, Kanpur, India.0000-0002-9855-9368RituparnaDattaCapgemini Technological Services India Limited, Bengaluru, India.0000-0003-3816-243810.21105/joss.05927https://doi.org/10.5281/zenodo.10819242Pythonhttps://joss.theoj.org/papers/10.21105/joss.05927.pdfRobotics, Jacobian, Kinematicstag:joss.theoj.org,2005:Paper/47592024-03-20T16:19:58Z2024-03-21T00:23:03ZPywaterflood: Well connectivity analysis through capacitance-resistance modelingacceptedv0.3.12023-09-16 18:42:32 UTC952024-03-20 16:19:58 UTC920246191FrankMalePennsylvania State University, University Park, PA, USA0000-0002-3402-557810.21105/joss.06191https://doi.org/10.5281/zenodo.10815882Python, Rusthttps://joss.theoj.org/papers/10.21105/joss.06191.pdfwell connectivity analysis, waterfloods, CO2 floods, Geothermal energy, multiphase flowtag:joss.theoj.org,2005:Paper/48212024-03-19T09:01:07Z2024-03-20T00:01:13ZGTFS Segments: A Fast and Efficient Library to Generate Bus Stop Spacingsacceptedv2.0.12023-09-28 22:06:14 UTC952024-03-19 09:01:07 UTC920246306SaipraneethDevunuriDepartment of Civil and Environmental Engineering, University of Illinois Urbana-Champaign0000-0002-5911-4681LewisLeheDepartment of Civil and Environmental Engineering, University of Illinois Urbana-Champaign0000-0001-8029-170610.21105/joss.06306https://doi.org/10.5281/zenodo.10681151Pythonhttps://joss.theoj.org/papers/10.21105/joss.06306.pdfGTFS, Public Transit, Stop Spacings, Bus Stopstag:joss.theoj.org,2005:Paper/47072024-03-19T09:00:35Z2024-03-20T00:01:17Zgreeks: Sensitivities of Prices of Financial Options and Implied Volatilitiesaccepted1.2.02023-08-17 21:06:01 UTC952024-03-19 09:00:35 UTC920245987AnselmHuddeUniversity of Applied Sciences Koblenz, Germany0000-0002-5652-281510.21105/joss.05987https://doi.org/10.5281/zenodo.10806607R, C++https://joss.theoj.org/papers/10.21105/joss.05987.pdfOption Pricing, Financial Mathematics, Malliavin Calculustag:joss.theoj.org,2005:Paper/48242024-03-18T12:36:12Z2024-03-19T00:01:19ZShapelets: A Python package implementing shapelet functions and their applicationsacceptedv0.12023-09-30 00:32:46 UTC952024-03-18 12:36:12 UTC920246058MatthewPeresTinoDepartment of Chemical Engineering, University of Waterloo, Ontario, Canada0009-0005-6832-1761AbbasYusufAbdulazizDepartment of Chemical Engineering, University of Waterloo, Ontario, CanadaRobertSudermanGoogle Inc.ThomasAkdenizEast Coast Asset Management SEZCNasserMohieddinAbukhdeirDepartment of Chemical Engineering, University of Waterloo, Ontario, Canada, Department of Physics and Astronomy, University of Waterloo, Ontario, Canada, Waterloo Institute for Nanotechnology, University of Waterloo, Ontario, Canada0000-0002-1772-037610.21105/joss.06058https://doi.org/10.5281/zenodo.10819578Pythonhttps://joss.theoj.org/papers/10.21105/joss.06058.pdfshapelets, self-assembly, astronomy, image processing, machine learningtag:joss.theoj.org,2005:Paper/48542024-03-18T12:28:23Z2024-03-19T00:01:17ZImbalance: A comprehensive multi-interface Julia toolbox to address class imbalanceacceptedv0.1.22023-10-17 14:48:00 UTC952024-03-18 12:28:23 UTC920246310EssamWisamCairo University, Egypt0009-0009-1198-7166AnthonyBlaomUniversity of Auckland, New Zealand0000-0001-6689-886X10.21105/joss.06310https://doi.org/10.5281/zenodo.10823254Juliahttps://joss.theoj.org/papers/10.21105/joss.06310.pdfmachine learning, classification, class imbalance, resampling, oversampling, undersampling, julia