Software to simulate populations of mitogenomes using R and C++ via Rcpp. Such simulations are useful to for example estimate the distribution of number of individuals sharing a mitogenome which is...

A "crystal ball" for exploring 2-dimensional hyperbolic space using the PoincarĂ© disc model. The entire graph or point configuration can be translated and rotated by dragging the ambient, and...

surfinpy is a code designed for the generation of surface phase diagrams from energy minimisation data. It is built in Python, relying on numpy for the calculations and matplotlib for the...

IDTxl is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory. IDTxl is written in Python and...

Python for Mycorrhizal Symbiosis data analysis is a graphical user interface-based software which helps perform data visualization and statistical analysis of mycorrhizal fungi colonization of...

A software for a semi-automatic digitization of pollen diagrams or other types of stratigraphic diagrams using the command line or a graphical user interface.

This R package aims to quantify and remove putative double strand DNA from a strand-specific RNA sample. It has recently been accepted to Bioconductor Release 3.8.

AxoPy is a system for creating human-computer interface experiments involving the use of electrophysiological signals, such as electromyography (EMG) or electroencephalography (EEG). It is intended...

BoltzMM is an R package which provides probability computation, data generation, and model estimation for fully-visible Boltzmann machines.

arcesetc is an exposure time calculator for the Astrophysical Research Consortium (ARC) Echelle Spectrograph (ARCES) on the ARC 3.5 m Telescope at Apache Point Observatory. It constructs S/N curves...