mikldk / mitolina

Software to simulate populations of mitogenomes using R and C++ via Rcpp. Such simulations are useful to for example estimate the distribution of number of individuals sharing a mitogenome which is...

lateral / crystal-ball

A "crystal ball" for exploring 2-dimensional hyperbolic space using the Poincaré disc model. The entire graph or point configuration can be translated and rotated by dragging the ambient, and...

symmy596 / SurfinPy

surfinpy is a code designed for the generation of surface phase diagrams from energy minimisation data. It is built in Python, relying on numpy for the calculations and matplotlib for the...

pwollstadt / IDTxl

IDTxl is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory. IDTxl is written in Python and...

jschnab / pyms-plot

Python for Mycorrhizal Symbiosis data analysis is a graphical user interface-based software which helps perform data visualization and statistical analysis of mycorrhizal fungi colonization of...

Chilipp / straditize

A software for a semi-automatic digitization of pollen diagrams or other types of stratigraphic diagrams using the command line or a graphical user interface.

UofABioinformaticsHub / strandCheckR

This R package aims to quantify and remove putative double strand DNA from a strand-specific RNA sample. It has recently been accepted to Bioconductor Release 3.8.

axopy / axopy

AxoPy is a system for creating human-computer interface experiments involving the use of electrophysiological signals, such as electromyography (EMG) or electroencephalography (EEG). It is intended...

andrewthomasjones / BoltzMM

BoltzMM is an R package which provides probability computation, data generation, and model estimation for fully-visible Boltzmann machines.

bmorris3 / arcesetc

arcesetc is an exposure time calculator for the Astrophysical Research Consortium (ARC) Echelle Spectrograph (ARCES) on the ARC 3.5 m Telescope at Apache Point Observatory. It constructs S/N curves...