tag:joss.theoj.org,2005:/papers/in/M4?page=2
Journal of Open Source Software
2020-09-07T23:50:55Z
Journal of Open Source Software
https://joss.theoj.org
tag:joss.theoj.org,2005:Paper/1669
2020-09-07T23:50:55Z
2021-02-15T11:30:43Z
Flint: a simulator for biological and physiological models in ordinary and stochastic differential equations
accepted
v2.3.0
2020-05-22 02:28:34 UTC
53
2020-09-07 23:50:55 UTC
5
2020
2331
Takeshi
Abe
Graduate School of Medicine, Yamaguchi University
0000-0002-7074-4561
Yoshiyuki
Asai
Graduate School of Medicine, Yamaguchi University
0000-0001-5519-4306
10.21105/joss.02331
https://doi.org/10.5281/zenodo.4017040
M4, C++, C
https://joss.theoj.org/papers/10.21105/joss.02331.pdf
biology, physiology, numerical analysis, simulation, ODE, SDE
tag:joss.theoj.org,2005:Paper/1697
2020-07-28T15:33:53Z
2021-02-15T11:30:36Z
GPP, the Generic Preprocessor
accepted
2.26
2020-05-28 14:03:15 UTC
51
2020-07-28 15:33:53 UTC
5
2020
2400
Tristan
Miller
Austrian Research Institute for Artificial Intelligence
0000-0002-0749-1100
Denis
Auroux
Department of Mathematics, Harvard University
10.21105/joss.02400
https://doi.org/10.5281/zenodo.3961322
M4, C
https://joss.theoj.org/papers/10.21105/joss.02400.pdf
preprocessor, macro processor
tag:joss.theoj.org,2005:Paper/1441
2020-07-21T15:14:06Z
2021-02-15T11:31:08Z
BGGM: Bayesian Gaussian Graphical Models in R
accepted
1.0.0
2020-01-15 22:44:06 UTC
51
2020-07-21 15:14:06 UTC
5
2020
2111
Donald
R.
Williams
Department of Psychology, University of California, Davis
Joris
Mulder
Department of Methodology and Statistics, Tilburg University
10.21105/joss.02111
https://doi.org/10.5281/zenodo.3954503
R, M4, C++
https://joss.theoj.org/papers/10.21105/joss.02111.pdf
Gaussian graphical models, Bayesian, Bayes factor, partial correlation
tag:joss.theoj.org,2005:Paper/742
2019-07-25T16:37:29Z
2021-02-15T11:32:45Z
rdbsp: An Open Source Rock Dynamic Behavior Simulation Program
accepted
v1.0.0
2018-11-30 17:17:56 UTC
39
2019-07-25 16:37:29 UTC
4
2019
1328
Zhang
Ning
School of Science, Nanjing University of Science and Technology, Nanjing, Jiangsu, China
0000-0003-3597-0691
10.21105/joss.01328
https://doi.org/10.5281/zenodo.3335406
C, C++, M4, XSLT
https://joss.theoj.org/papers/10.21105/joss.01328.pdf
rock, dynamic behavior, forward Euler
tag:joss.theoj.org,2005:Paper/983
2019-06-20T19:48:51Z
2021-02-15T11:32:13Z
phylosmith: an R-package for reproducible and efficient microbiome analysis with phyloseq-objects
accepted
0.99.0
2019-05-03 03:31:15 UTC
38
2019-06-20 19:48:51 UTC
4
2019
1442
Schuyler
D.
Smith
Department of Bioinformatics and Computational Biology, Iowa State University
0000-0001-5720-5611
10.21105/joss.01442
https://doi.org/10.5281/zenodo.3251024
R, M4, C++
https://joss.theoj.org/papers/10.21105/joss.01442.pdf
microbiology, microbiome, metagenomics, microbial ecology
tag:joss.theoj.org,2005:Paper/607
2019-06-11T18:28:41Z
2021-02-15T11:33:03Z
imager: an R package for image processing based on CImg
accepted
0.41.1
2018-08-28 07:17:07 UTC
38
2019-06-11 18:28:41 UTC
4
2019
1012
Simon
Barthelmé
CNRS, Gipsa-lab, Grenoble INP, France
David
Tschumperlé
CNRS, Greyc, ENSICaen, France
10.21105/joss.01012
https://doi.org/10.5281/zenodo.3235256
R, M4, C++, C
https://joss.theoj.org/papers/10.21105/joss.01012.pdf
image processing
tag:joss.theoj.org,2005:Paper/362
2018-05-29T17:32:02Z
2021-02-15T11:33:41Z
PetIBM: toolbox and applications of the immersed-boundary method on distributed-memory architectures
accepted
v0.3
2018-01-26 19:09:21 UTC
25
2018-05-29 17:32:02 UTC
3
2018
558
Pi-Yueh
Chuang
Department of Mechanical and Aerospace Engineering, The George Washington University, Washington, DC, USA
0000-0001-6330-2709
Olivier
Mesnard
Department of Mechanical and Aerospace Engineering, The George Washington University, Washington, DC, USA
0000-0001-5335-7853
Anush
Krishnan
nuTonomy Inc., Cambridge, MA, USA (previously at Boston University)
0000-0001-6409-7022
Lorena
A.
Barba
Department of Mechanical and Aerospace Engineering, The George Washington University, Washington, DC, USA
0000-0001-5812-2711
10.21105/joss.00558
https://doi.org/10.5281/zenodo.1255132
C++, M4
https://joss.theoj.org/papers/10.21105/joss.00558.pdf
Computational Fluid Dynamics, Immersed-Boundary Method, PETSc, GPU, NVIDIA AmgX