tag:joss.theoj.org,2005:/papers/in/MJournal of Open Source Software2023-01-08T20:38:49ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/38452023-01-08T20:38:49Z2023-01-09T00:01:20ZIGraph/M: graph theory and network analysis for Mathematicaaccepted0.6.22022-08-30 10:02:13 UTC812023-01-08 20:38:49 UTC820234899SzabolcsHorvátMax Planck Institute for Cell Biology and Genetics, Dresden, Germany \newline, Center for Systems Biology Dresden, Dresden, Germany \newline0000-0002-3100-523XJakubPodkalickiIndependent Developer, Poland \newlineGáborCsárdiRStudio \newline0000-0001-7098-9676TamásNepuszIndependent Developer, Hungary \newline0000-0002-1451-338XVincentTraagCentre for Science and Technology Studies, Leiden University, Leiden, Netherlands \newline0000-0003-3170-3879FabioZaniniLowy Cancer Research Centre, University of New South Wales, Kensington, NSW, Australia \newline0000-0001-7097-8539DanielNoomIndependent Developer, Netherlands \newline10.21105/joss.04899https://doi.org/10.5281/zenodo.7469228Mathematica, M, C++, Chttps://joss.theoj.org/papers/10.21105/joss.04899.pdfWolfram Language, graph theory, network analysistag:joss.theoj.org,2005:Paper/29852021-11-11T00:08:18Z2021-11-12T00:01:39ZHeta compiler: a software tool for the development of large-scale QSP models and compilation into simulation formatsacceptedv0.6.62021-08-20 14:15:48 UTC672021-11-11 00:08:18 UTC620213708EvgenyMetelkinInSysBio LLC0000-0001-6612-537310.21105/joss.03708https://doi.org/10.5281/zenodo.5666487JavaScript, Mhttps://joss.theoj.org/papers/10.21105/joss.03708.pdfsystems biology, quantitative systems pharmacology, mathematical modeling, pharmacometrics, format conversion, sbml, hetatag:joss.theoj.org,2005:Paper/23752021-07-29T10:29:16Z2021-07-30T00:02:30ZPXO (Poly-XTAL Operations): MATLAB Codebase to Generate, Analyse and Export Complex 2D Spatio-Temporally Gradient Grain Structuresaccepted10.0.22021-02-07 14:43:01 UTC632021-07-29 10:29:16 UTC620213190SunilAnandatheerthaCoventry University, Priory street, Coventry, United Kingdom, CV1 5FB0000-0001-6535-819110.21105/joss.03190https://doi.org/10.5281/zenodo.5142160Matlab, Mhttps://joss.theoj.org/papers/10.21105/joss.03190.pdfgrain structure generation, texture and grain structuretag:joss.theoj.org,2005:Paper/6662019-05-20T13:12:29Z2021-02-15T11:32:53ZEMViz (Early Music Visualization): MATLAB runtime applicationacceptedv1.0.02018-10-16 14:08:29 UTC372019-05-20 13:12:29 UTC420191094AaronCarter-ÉnyìAssistant Professor, Morehouse College, Instructor, Spelman College, Fellow, Fulbright Scholar Program, Project Director, Algorithmic Thinking, Analysis and Visualization in Music (ATAVizM)0000-0003-2614-477710.21105/joss.01094https://doi.org/10.5281/zenodo.3051781Matlab, Mhttps://joss.theoj.org/papers/10.21105/joss.01094.pdfMATLAB, music, arc diagrams, visualization, MIDItag:joss.theoj.org,2005:Paper/7202019-01-21T12:28:10Z2021-02-15T11:32:49ZA MATLAB toolbox to detect and analyze marine heatwavesacceptedv1.02018-11-08 02:46:21 UTC332019-01-21 12:28:10 UTC420191124ZijieZhaoSchool of Earth Sciences, The University of Melbourne, Melbourne, Victoria, Australia, Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia, Australian Research Council Centre of Excellence for Climate System Science, Hobart, Tasmania, Australia, College of Oceanic and Atmospheric Sciences, Ocean University of China, Qingdao, China0000-0003-3403-878XMaximeMarinInstitute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia, Australian Research Council Centre of Excellence for Climate System Science, Hobart, Tasmania, Australia, CSIRO Oceans & Atmosphere, Indian Ocean Marine Research Centre, Crawley 6009, Western Australia, Australia0000-0001-7209-445410.21105/joss.01124https://doi.org/10.5281/zenodo.2545437Matlab, M, Pythonhttps://joss.theoj.org/papers/10.21105/joss.01124.pdfMATLAB, heatwaves, extremes, oceantag:joss.theoj.org,2005:Paper/4642018-07-03T11:27:38Z2021-02-15T11:33:28ZBeeNestABM: An open-source agent-based model of spatiotemporal distribution of bumblebees in nestsaccepted1.02018-04-16 20:11:58 UTC272018-07-03 11:27:38 UTC32018718AshleeN. FordVersyptSchool of Chemical Engineering, Oklahoma State University0000-0001-9059-5703JamesD.CrallDepartment of Organismic and Evolutionary Biology, Harvard UniversityBiswadipDeyDepartment of Mechanical & Aerospace Engineering, Princeton University10.21105/joss.00718https://doi.org/10.5281/zenodo.1303422Matlab, Mhttps://joss.theoj.org/papers/10.21105/joss.00718.pdftoxicology, biology, mathematical model, MATLABtag:joss.theoj.org,2005:Paper/4582018-06-06T23:06:55Z2021-02-15T11:33:29ZOctApps: a library of Octave functions for continuous gravitational-wave data analysisacceptedv0.12018-04-10 09:16:38 UTC262018-06-06 23:06:55 UTC32018707KarlWetteARC Centre of Excellence for Gravitational Wave Discovery (OzGrav) and Centre for Gravitational Physics, Research School of Physics and Engineering, The Australian National University, ACT 0200, Australia, Max-Planck-Institut für Gravitationsphysik (Albert-Einstein-Institut), D-30167 Hannover, Germany, Leibniz Universität Hannover, D-30167 Hannover, Germany0000-0002-4394-7179ReinhardPrixMax-Planck-Institut für Gravitationsphysik (Albert-Einstein-Institut), D-30167 Hannover, Germany, Leibniz Universität Hannover, D-30167 Hannover, Germany0000-0002-3789-6424DavidKeitelInstitute for Gravitational Research, SUPA, University of Glasgow, Glasgow G12 8QQ, U.K., Max-Planck-Institut für Gravitationsphysik (Albert-Einstein-Institut), D-30167 Hannover, Germany, Leibniz Universität Hannover, D-30167 Hannover, Germany0000-0002-2824-626XMatthewPitkinInstitute for Gravitational Research, SUPA, University of Glasgow, Glasgow G12 8QQ, U.K.0000-0003-4548-526XChristophDreissigackerMax-Planck-Institut für Gravitationsphysik (Albert-Einstein-Institut), D-30167 Hannover, Germany, Leibniz Universität Hannover, D-30167 Hannover, GermanyJohnT.WhelanSchool of Mathematical Sciences and Center for Computational Relativity & Gravitation, Rochester Institute of Technology, Rochester, NY 14623, U.S.A., Max-Planck-Institut für Gravitationsphysik (Albert-Einstein-Institut), D-14476 Golm, Germany0000-0001-5710-6576PaolaLeaciUniversità di Roma ‘La Sapienza’, I-00185 Roma, Italy, INFN, Sezione di Roma, I-00185 Roma, Italy, Max-Planck-Institut für Gravitationsphysik (Albert-Einstein-Institut), D-14476 Golm, Germany10.21105/joss.00707https://doi.org/10.5281/zenodo.1283525Ruby, Matlab, Mhttps://joss.theoj.org/papers/10.21105/joss.00707.pdfOctave, gravitational waves, continuous waves, pulsars, data analysistag:joss.theoj.org,2005:Paper/3702018-03-06T14:05:06Z2021-02-15T11:33:39ZGramm: grammar of graphics plotting in Matlabacceptedv2.232018-01-31 16:21:18 UTC232018-03-06 14:05:06 UTC32018568PierreMorelGerman Primate Center, Göttingen, Germany0000-0003-0984-701610.21105/joss.00568https://doi.org/10.5281/zenodo.1188423Matlab, Mhttps://joss.theoj.org/papers/10.21105/joss.00568.pdfdata visualization, grouped data, visual analytics, plotting, matlab, statistical graphicstag:joss.theoj.org,2005:Paper/2242017-11-12T00:00:00Z2021-02-15T11:34:03ZHytool: an open source matlab toolbox for the interpretation of hydraulic tests using analytical solutionsaccepted2.052017-07-06 20:55:35 UTC192017-11-12 00:00:00 UTC22017441PhilippeRenardUniversity of Neuchâtel0000-0003-4504-435X10.21105/joss.00441https://doi.org/10.5281/zenodo.1045538Matlab, Mhttps://joss.theoj.org/papers/10.21105/joss.00441.pdfhydraulic tests, pumping tests, well tests, hydrogeology