tag:joss.theoj.org,2005:/papers/edited_by/@prashjhaJournal of Open Source Software2024-02-02T16:32:04ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/45712024-02-02T16:32:04Z2024-02-03T00:00:40ZFEniCS-arclength: A numerical continuation package in FEniCS for nonlinear problems in solid mechanicsacceptedv0.1.02023-06-29 15:19:07 UTC942024-02-02 16:32:04 UTC920245727PeerasaitPrachasereeDepartment of Mechanical Engineering, Boston University, Massachusetts, the United States of America0009-0000-3325-1410SaeedMohammadzadehDepartment of Systems Engineering, Boston University, Massachusetts, the United States of America0000-0001-9879-044XBerkinDortdivanliogluDepartment of Civil, Architectural and Environmental Engineering, The University of Texas at Austin, Austin, the United States of America, Oden Institute for Computational Engineering and Sciences, The University of Texas at Austin, Austin, the United States of America0000-0001-7105-1452EmmaLejeuneDepartment of Mechanical Engineering, Boston University, Massachusetts, the United States of America0000-0001-8099-346810.21105/joss.05727https://doi.org/10.5281/zenodo.10563095Pythonhttps://joss.theoj.org/papers/10.21105/joss.05727.pdfFEniCS, Finite Element Analysis, Solid Mechanicstag:joss.theoj.org,2005:Paper/37092023-10-15T06:29:48Z2023-10-19T09:42:05ZOT_Analysis: a software for rich analysis of force curves when probing living cells with optical tweezersacceptedv0.2.862022-07-07 16:20:47 UTC902023-10-15 06:29:48 UTC820234877ThierryGallianoInserm UMR 1067, CNRS UMR 7333, AMU UM61, The Turing Centre for Living Systems (CENTURI) ; Lab. Adhésion et Inflammation ; Marseille - FranceGuillaumeGayFrance Bio Imaging ; Montpellier - France0000-0002-5444-5246LaurentLimozinInserm UMR 1067, CNRS UMR 7333, AMU UM61, The Turing Centre for Living Systems (CENTURI) ; Lab. Adhésion et Inflammation ; Marseille - France0000-0001-9523-8086Pierre-HenriPuechInserm UMR 1067, CNRS UMR 7333, AMU UM61, The Turing Centre for Living Systems (CENTURI) ; Lab. Adhésion et Inflammation ; Marseille - France0000-0002-8521-068510.21105/joss.04877https://doi.org/10.5281/zenodo.8345307Pythonhttps://joss.theoj.org/papers/10.21105/joss.04877.pdfoptical tweezers, cell biology, mechanobiologytag:joss.theoj.org,2005:Paper/41052023-06-24T21:26:35Z2023-06-26T02:50:19ZSATLLA0: A Flight Software Platform for Aerospace and STEM Educationaccepted4.0.52022-12-26 19:50:11 UTC862023-06-24 21:26:35 UTC820235147RonyRonenSchool of Computer Science, Ariel University, 47100, Israel0000-0002-1300-5236MichaelBritvinFaculty of Engineering, Ariel University, 47100, Israel0009-0003-5492-4014BoazBenMosheSchool of Computer Science, Ariel University, 47100, Israel0000-0002-1580-542110.21105/joss.05147https://doi.org/10.5281/zenodo.8060399C++, C, Pythonhttps://joss.theoj.org/papers/10.21105/joss.05147.pdfArduino, CubeSat, PicoSat, New-space, Loratag:joss.theoj.org,2005:Paper/39562023-04-23T06:19:47Z2023-04-24T00:02:39ZnnTensor: An R package for non-negative matrix/tensor decompositionacceptedv1.1.92022-10-13 12:47:07 UTC842023-04-23 06:19:47 UTC820235015KokiTsuyuzakiLaboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research, Japan, Japan Science and Technology Agency, PRESTO, Japan0000-0003-3797-2148ItoshiNikaidoLaboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research, Japan, Science Innovation (Bioinformatics), Degree Programs in Systems and Information Engineering, Graduate School of Science and Technology), University of Tsukuba, Japan, Department of Functional Genome Informatics, Division of Biological Data Science, Medical Research Institute, Tokyo Medical and Dental University, Japan0000-0002-7261-257010.21105/joss.05015https://doi.org/10.5281/zenodo.7848088Rhttps://joss.theoj.org/papers/10.21105/joss.05015.pdfnon-negative matrix factorization, non-negative tensor decomposition, dimension reductiontag:joss.theoj.org,2005:Paper/38452023-01-08T20:38:49Z2023-01-09T00:01:20ZIGraph/M: graph theory and network analysis for Mathematicaaccepted0.6.22022-08-30 10:02:13 UTC812023-01-08 20:38:49 UTC820234899SzabolcsHorvátMax Planck Institute for Cell Biology and Genetics, Dresden, Germany \newline, Center for Systems Biology Dresden, Dresden, Germany \newline0000-0002-3100-523XJakubPodkalickiIndependent Developer, Poland \newlineGáborCsárdiRStudio \newline0000-0001-7098-9676TamásNepuszIndependent Developer, Hungary \newline0000-0002-1451-338XVincentTraagCentre for Science and Technology Studies, Leiden University, Leiden, Netherlands \newline0000-0003-3170-3879FabioZaniniLowy Cancer Research Centre, University of New South Wales, Kensington, NSW, Australia \newline0000-0001-7097-8539DanielNoomIndependent Developer, Netherlands \newline10.21105/joss.04899https://doi.org/10.5281/zenodo.7469228Mathematica, M, C++, Chttps://joss.theoj.org/papers/10.21105/joss.04899.pdfWolfram Language, graph theory, network analysistag:joss.theoj.org,2005:Paper/36762022-10-09T08:15:05Z2022-10-10T00:01:31ZNanomesh: A Python workflow tool for generating meshes from image dataaccepted0.9.02022-06-24 11:34:16 UTC782022-10-09 08:15:05 UTC720224654StefSmeetsNetherlands eScience Center, The Netherlands0000-0002-5413-9038NicolasRenaudNetherlands eScience Center, The Netherlands0000-0001-9589-2694LarsJ. Corbijnvan WillenswaardUniversity of Twente, The Netherlands0000-0001-6554-152710.21105/joss.04654https://doi.org/10.5281/zenodo.7157382Python, Jupyter Notebook, PowerShellhttps://joss.theoj.org/papers/10.21105/joss.04654.pdffinite-element-methods, microscopy, meshing, image-processingtag:joss.theoj.org,2005:Paper/33442022-09-05T10:00:58Z2022-09-06T00:01:12Zospgrillage: A bridge deck grillage analysis preprocessor for OpenSeesPyacceptedv0.1.12022-02-16 06:57:37 UTC772022-09-05 10:00:58 UTC720224404J.w.NganMonash University, Australia0000-0001-7514-0065C.c.CapraniMonash University, Australia0000-0001-6166-089510.21105/joss.04404https://doi.org/10.5281/zenodo.7034267Pythonhttps://joss.theoj.org/papers/10.21105/joss.04404.pdfBridge, grillage, finite element, load analysistag:joss.theoj.org,2005:Paper/34592022-08-26T18:29:51Z2022-10-11T08:56:36ZEPICpy: A Python Interface for EPIC Computational Cognitive Modelingacceptedv2022.3.52022-04-07 18:54:45 UTC762022-08-26 18:29:51 UTC720224533TravisL.SeymourUniversity of California Santa Cruz, US10.21105/joss.04533https://doi.org/10.5281/zenodo.7020282Python, C++, Chttps://joss.theoj.org/papers/10.21105/joss.04533.pdfpython, cognitive architecture, cognitive psychology, human performance, simulationtag:joss.theoj.org,2005:Paper/32652022-07-07T23:44:45Z2022-07-08T00:00:40ZSimuPy Flight Vehicle Toolkitaccepted0.0.12021-12-27 18:46:50 UTC752022-07-07 23:44:45 UTC720224299BenjaminW. l.MargolisNASA Ames Research Center, Systems Analysis Office0000-0001-5602-1888KennethR.LyonsNASA Ames Research Center, Systems Analysis Office0000-0002-9143-845910.21105/joss.04299https://doi.org/10.5281/zenodo.6789504Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.04299.pdfflight vehicle, simulationtag:joss.theoj.org,2005:Paper/31722022-05-25T14:32:40Z2022-05-26T00:01:21ZGXBeam: A Pure Julia Implementation of Geometrically Exact Beam Theoryacceptedv0.3.12021-11-16 20:23:22 UTC732022-05-25 14:32:40 UTC720223997TaylorMcDonnellDepartment of Mechanical Engineering, Brigham Young University, Provo, UT, 84602, USA0000-0001-7993-5703AndrewNingDepartment of Mechanical Engineering, Brigham Young University, Provo, UT, 84602, USA0000-0003-2190-823X10.21105/joss.03997https://doi.org/10.5281/zenodo.6558458Juliahttps://joss.theoj.org/papers/10.21105/joss.03997.pdfstructural dynamics, finite element analysis, beam elements