tag:joss.theoj.org,2005:/papers/edited_by/@galessiorobJournal of Open Source Software2024-03-09T08:42:01ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/46832024-03-09T08:42:01Z2024-03-10T00:01:18ZPerMetrics: A Framework of Performance Metrics for Machine Learning Modelsacceptedv1.4.22023-08-08 05:27:41 UTC952024-03-09 08:42:01 UTC920246143NguyenVan ThieuFaculty of Computer Science, Phenikaa University, Yen Nghia, Ha Dong, Hanoi, 12116, Vietnam.0000-0001-9994-874710.21105/joss.06143https://doi.org/10.5281/zenodo.3951205Pythonhttps://joss.theoj.org/papers/10.21105/joss.06143.pdfmodel assessment tools, performance metrics, classification validation metrics, regression evaluation criteria, clustering criterion indices, machine learning metricstag:joss.theoj.org,2005:Paper/44412023-11-21T14:31:42Z2023-11-22T00:01:07ZOpenTera: A Framework for Telehealth Applicationsacceptedv1.2.12023-04-19 14:03:04 UTC912023-11-21 14:31:42 UTC820235497DominicLétourneauInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, Canada0000-0001-7825-7533SimonBrièreResearch Center on Aging (CDRV), Université de Sherbrooke, Canada0009-0000-1224-8001Marc-AntoineMaheuxInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, Canada0000-0002-3983-8754CédricGodinInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, CanadaPhilippeWarrenInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, Canada0009-0008-4466-0963GabrielLauzierInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, CanadaIan-MathieuJolyInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, CanadaJérémieBourqueInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, Canada0009-0008-5868-9724PhilippeArsenaultInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, Canada0009-0003-0772-1177CynthiaVilanovaResearch Center on Aging (CDRV), Université de Sherbrooke, CanadaMichelTousignantResearch Center on Aging (CDRV), Université de Sherbrooke, Canada0000-0001-7561-1170FrançoisMichaudInterdisciplinary Institute for Technological Innovation (3IT), Université de Sherbrooke, Canada0000-0002-3639-777010.21105/joss.05497https://doi.org/10.5281/zenodo.10078847https://joss.theoj.org/papers/10.21105/joss.05497.pdfPython, Microservices, Tele-Health, Rehabilitation, Robotics, Telepresencetag:joss.theoj.org,2005:Paper/39172023-01-21T16:47:13Z2023-01-22T21:37:11Zlocalcovid19now: processing and mapping COVID-19 case data at subnational scalesaccepted0.0.0.99002022-09-22 21:22:01 UTC812023-01-21 16:47:13 UTC820234898StephenJ.BeckettSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, United States of America0000-0002-4410-2960FreyjaA.Brandel-TanisSchool of City and Regional Planning, Georgia Institute of Technology, Atlanta, GA, United States of America, School of Civil and Environmental Engineering, Georgia Institute of Technology, Atlanta, GA, United States of America0000-0003-2870-6980QuanNguyenSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, United States of America, School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, United States of AmericaAroonT.ChandeApplied Bioinformatics Laboratory, Georgia Institute of Technology, Atlanta, GA, United States of America0000-0001-5260-3135LavanyaRishishwarSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, United States of America, Applied Bioinformatics Laboratory, Georgia Institute of Technology, Atlanta, GA, United States of America0000-0002-2055-9392ClioAndrisSchool of City and Regional Planning, Georgia Institute of Technology, Atlanta, GA, United States of America, School of Interactive Computing, Georgia Institute of Technology, Atlanta, GA, United States of America0000-0002-8559-5079JoshuaS.WeitzSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, United States of America, School of Physics, Georgia Institute of Technology, Atlanta, GA, United States of America, Institut de Biologie, École Normale Supérieure, Paris, France0000-0002-3433-831210.21105/joss.04898https://doi.org/10.5281/zenodo.7542478R, Vim Snippethttps://joss.theoj.org/papers/10.21105/joss.04898.pdfepidemiology, COVID-19, mappingtag:joss.theoj.org,2005:Paper/38602023-01-17T10:48:58Z2023-01-18T00:01:00ZGNOLL: Efficient Multi-Lingual Software for Real-World Dice Notation and Extensionsacceptedv2.7.12022-09-09 08:40:26 UTC812023-01-17 10:48:58 UTC820234816IanFrederick Vigogne GoodbodyHunterIndependent Researcher0000-0003-3408-813810.21105/joss.04816https://doi.org/10.5281/zenodo.7542433Python, C++, C#, PHPhttps://joss.theoj.org/papers/10.21105/joss.04816.pdfPerl, C, Go, R, Java, Julia, statistics, board games, ttrpgs, game designtag:joss.theoj.org,2005:Paper/32972022-05-25T14:44:56Z2022-05-26T00:01:20ZImagedata: A Python library to handle medical image data in NumPy array subclass Seriesaccepted1.4.02022-01-19 14:31:44 UTC732022-05-25 14:44:56 UTC720224133ErlingAndersenHaukeland University Hospital, Dept. of Clinical Engineering, N-5021 Bergen, Norway, Mohn Medical Imaging and Visualization Centre, Haukeland University Hospital, Dept. of Radiology, N-5021 Bergen, Norway0000-0001-8268-120610.21105/joss.04133https://doi.org/10.5281/zenodo.6562674Pythonhttps://joss.theoj.org/papers/10.21105/joss.04133.pdfdicom, python, medical imaging, pydicom, pynetdicom, itk, niftitag:joss.theoj.org,2005:Paper/32992022-04-21T09:07:08Z2022-04-22T00:00:19Zyadg: yet another datagramacceptedv4.0.02022-01-20 13:16:36 UTC722022-04-21 09:07:08 UTC720224166PeterKrausEmpa - Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland0000-0002-4359-5003NicolasVetschEmpa - Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, SwitzerlandCorsinBattagliaEmpa - Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland10.21105/joss.04166https://doi.org/10.5281/zenodo.6413504Python, Rich Text Formathttps://joss.theoj.org/papers/10.21105/joss.04166.pdfchemistry, catalysis, electrochemistry, FAIR datatag:joss.theoj.org,2005:Paper/32002022-03-22T13:06:50Z2022-03-23T00:00:48Zhelayo: Reconstructing Sanskrit texts from manuscript witnessesacceptedv0.5 (helayo) v0.8 (matrix editor)2021-12-01 14:16:58 UTC712022-03-22 13:06:50 UTC720224022CharlesLiCentre nationale de la recherche scientifique, École des hautes études en sciences sociales0000-0001-8247-937410.21105/joss.04022https://doi.org/10.5281/zenodo.6334073Haskell, JavaScript, XSLThttps://joss.theoj.org/papers/10.21105/joss.04022.pdfJavascript, critical editing, philology, Sanskrit, sequence alignmenttag:joss.theoj.org,2005:Paper/30982021-12-02T15:30:48Z2021-12-03T00:01:32Zpiecewise-regression (aka segmented regression) in Pythonaccepted1.0.42021-10-04 12:38:34 UTC682021-12-02 15:30:48 UTC620213859CharliePilgrimCentre for Doctoral Training in Mathematics for Real-World Systems, University of Warwick, Coventry, UK, The Alan Turing Institute, London, UK0000-0002-3800-677X10.21105/joss.03859https://doi.org/10.5281/zenodo.5742317Pythonhttps://joss.theoj.org/papers/10.21105/joss.03859.pdfregression, statistics, segmented regression, breakpoint analysistag:joss.theoj.org,2005:Paper/30842021-12-01T01:50:50Z2021-12-02T00:02:27ZThe jagstargets R package: a reproducible workflow framework for Bayesian data analysis with JAGSaccepted0.0.12021-09-28 02:14:54 UTC682021-12-01 01:50:50 UTC620213877WilliamMichaelLandauEli Lilly and Company0000-0003-1878-325310.21105/joss.03877https://doi.org/10.5281/zenodo.5745858Rhttps://joss.theoj.org/papers/10.21105/joss.03877.pdfreproducibility, high-performance computing, pipeline, workflow, Make, Bayesian, JAGStag:joss.theoj.org,2005:Paper/30602021-11-12T21:11:08Z2021-11-13T00:00:35ZA flexible search system for high-accuracy identification of biological entities and moleculesaccepted0.6.02021-09-10 18:06:43 UTC672021-11-12 21:11:08 UTC620213756MaxFranzThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0003-0169-0480JeffreyV.WongThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0002-8912-5699MetinCanSiperComputational Biology Program, Oregon Health and Science University, Portland, OR 97239, USA0000-0002-7556-093XChristianDallagoDepartment of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Systems Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Informatics, Technische Universität München, 85748 Garching, Germany0000-0003-4650-6181JohnGiorgiThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0001-9621-5046EmekDemirComputational Biology Program, Oregon Health and Science University, Portland, OR 97239, USA0000-0002-3663-7113ChrisSanderDepartment of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, 02215, USA, Broad Institute of MIT and Harvard, Boston, MA, 02142, USA0000-0001-6059-6270GaryD.BaderThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada, Department of Computer Science, University of Toronto, Ontario, M5S 2E4, Canada, Department of Molecular Genetics, University of Toronto, Ontario, M5S 1A8, Canada, The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, M5G 1X5, Canada, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, M5G 2C1, Canada0000-0003-0185-886110.21105/joss.03756https://doi.org/10.5281/zenodo.4891545JavaScripthttps://joss.theoj.org/papers/10.21105/joss.03756.pdfbiological entities, small molecules, grounding, identifiers, identification, search, Docker