tag:joss.theoj.org,2005:/papers/edited_by/@arfonJournal of Open Source Software2024-02-29T09:57:40ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/48482024-02-29T09:57:40Z2024-03-01T00:00:27ZSurjectors: surjection layers for density estimation with normalizing flowsacceptedv0.0.32023-10-14 23:34:59 UTC942024-02-29 09:57:40 UTC920246188SimonDirmeierSwiss Data Science Center, Zurich, Switzerland, ETH Zurich, Zurich, Switzerland10.21105/joss.06188https://doi.org/10.5281/zenodo.10679869Pythonhttps://joss.theoj.org/papers/10.21105/joss.06188.pdfJAX, Density estimation, Normalizing flow, Machine learning, Statisticstag:joss.theoj.org,2005:Paper/49042024-01-19T08:12:03Z2024-01-20T00:00:42ZCM++ - A Meta-method for Well-Connected Community Detectionacceptedv4.0.02023-10-29 23:28:31 UTC932024-01-19 08:12:03 UTC920246073VikramRamavarapuDepartment of Computer Science, University of Illinois Urbana-Champaign, IL 61801, USA0009-0001-8875-7213FábioJoseAyresInsper Institute, Sao Paulo, Brazil0009-0000-6821-4687MinhyukParkDepartment of Computer Science, University of Illinois Urbana-Champaign, IL 61801, USA0000-0002-8676-7565VidyaKamathPailodiDepartment of Computer Science, University of Illinois Urbana-Champaign, IL 61801, USA0009-0000-0987-5901JoãoAlfredo CardosoLamyInsper Institute, Sao Paulo, Brazil0009-0005-4744-4754TandyWarnowDepartment of Computer Science, University of Illinois Urbana-Champaign, IL 61801, USA0000-0001-7717-3514GeorgeChackoDepartment of Computer Science, University of Illinois Urbana-Champaign, IL 61801, USA0000-0002-2127-189210.21105/joss.06073https://doi.org/10.5281/zenodo.10501118Python, Rhttps://joss.theoj.org/papers/10.21105/joss.06073.pdfCM++, connectivity, minimum cut, complex network analysis, graph, network, degree, clusteringtag:joss.theoj.org,2005:Paper/45722024-01-07T20:44:54Z2024-01-08T11:58:28ZinAccessMod: An R package to automate data downloading and processing for AccessModacceptedv1.02023-06-30 11:16:48 UTC932024-01-07 20:44:54 UTC920245879PabloTimonerGeoHealth group, Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, Switzerland0000-0003-4757-4928FleurHierinkGeoHealth group, Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, Switzerland0000-0002-2727-0540LoïcBaecherGeoHealth group, Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, SwitzerlandCarolineFuhrerHealth Resources and Services Availability Monitoring System (HeRAMS) Initiative, World Health Organization Headquarters. Geneva, Switzerland.NicolasRayGeoHealth group, Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, Switzerland0000-0002-4696-531310.21105/joss.05879https://doi.org/10.5281/zenodo.10466894Rhttps://joss.theoj.org/papers/10.21105/joss.05879.pdfGIS, geographical accessibility, health coveragetag:joss.theoj.org,2005:Paper/44422024-01-07T20:42:23Z2024-01-08T00:00:33ZDataScribe: An Omeka S module for structured data transcriptionacceptedv1.1.02023-04-19 17:22:03 UTC932024-01-07 20:42:23 UTC920245661JessicaM.OtisRoy Rosenzweig Center for History and New Media, George Mason University, USA0000-0001-5519-8331JamesSafleyDigital ScholarMeganBrettJefferson Library, Monticello0000-0002-7474-7196LincolnMullenRoy Rosenzweig Center for History and New Media, George Mason University, USA0000-0001-5103-691710.21105/joss.05661https://doi.org/10.5281/zenodo.10379756PHP, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.05661.pdfOmeka, digital humanities, transcriptiontag:joss.theoj.org,2005:Paper/48432024-01-07T20:40:46Z2024-01-08T00:00:30ZJobflow: Computational Workflows Made Simpleaccepted0.1.142023-10-10 17:26:07 UTC932024-01-07 20:40:46 UTC920245995AndrewS.RosenDepartment of Materials Science and Engineering, University of California, Berkeley, Berkeley, CA, USA, Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA0000-0002-0141-7006MaxGallantDepartment of Materials Science and Engineering, University of California, Berkeley, Berkeley, CA, USA, Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA0009-0008-4099-6144JanineGeorgeFederal Institute for Materials Research and Testing, Department Materials Chemistry, Berlin, Germany, Friedrich Schiller University Jena, Institute of Condensed Matter Theory and Solid-State Optics, Jena, Germany0000-0001-8907-0336JanoshRiebesellMaterials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA, Department of Physics, University of Cambridge, Cambridge, UK0000-0001-5233-3462HrushikeshSahasrabuddheDepartment of Materials Science and Engineering, University of California, Berkeley, Berkeley, CA, USA, Energy Storage and Distributed Resources Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA0000-0001-7346-4568Jimmy-XuanShenMaterials Science Division, Lawrence Livermore National Laboratory, Livermore, CA, USA0000-0002-2743-7531MingjianWenWilliam A. Brookshire Department of Chemical and Biomolecular Engineering, University of Houston, Houston, TX, USA0000-0003-0013-575XMatthewL.EvansMatgenix SRL, rue Armand Bury 185, 6534 Gozée, Belgium, Institut de la Matière Condensée et des Nanosciences, Université catholique de Louvain, Chemin des Étoiles 8, Louvain-la-Neuve 1348, Belgium0000-0002-1182-9098GuidoPetrettoMatgenix SRL, rue Armand Bury 185, 6534 Gozée, BelgiumDavidWaroquiersMatgenix SRL, rue Armand Bury 185, 6534 Gozée, Belgium, Institut de la Matière Condensée et des Nanosciences, Université catholique de Louvain, Chemin des Étoiles 8, Louvain-la-Neuve 1348, Belgium0000-0001-8943-9762Gian-MarcoRignaneseMatgenix SRL, rue Armand Bury 185, 6534 Gozée, Belgium, Institut de la Matière Condensée et des Nanosciences, Université catholique de Louvain, Chemin des Étoiles 8, Louvain-la-Neuve 1348, Belgium, School of Materials Science and Engineering, Northwestern Polytechnical University, No. 127 Youyi West Road, Xi’an 710072 Shaanxi, PR China0000-0002-1422-1205KristinA.PerssonDepartment of Materials Science and Engineering, University of California, Berkeley, Berkeley, CA, USA, Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA, Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, USA0000-0002-7212-6310AnubhavJainEnergy Storage and Distributed Resources Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA0000-0001-5893-9967AlexM.GanoseDepartment of Chemistry, Imperial College London, London, UK0000-0002-4486-332110.21105/joss.05995https://doi.org/10.5281/zenodo.10466868Pythonhttps://joss.theoj.org/papers/10.21105/joss.05995.pdfWorkflowstag:joss.theoj.org,2005:Paper/45902023-12-12T17:00:34Z2023-12-13T00:00:42Zpudu: A Python library for agnostic feature selection and explainability of Machine Learning spectroscopic problemsaccepted0.3.02023-07-10 08:59:28 UTC922023-12-12 17:00:34 UTC820235873EnricGrau-LuqueCatalonia Institute for Energy Research (IREC), Jardins de les Dones de Negre 1, 08930 Sant Adrià de Besòs, Spain.0000-0002-8357-5824IgnacioBecerril-RomeroCatalonia Institute for Energy Research (IREC), Jardins de les Dones de Negre 1, 08930 Sant Adrià de Besòs, Spain.0000-0002-7087-6097AlejandroPerez-RodriguezCatalonia Institute for Energy Research (IREC), Jardins de les Dones de Negre 1, 08930 Sant Adrià de Besòs, Spain., Departament d'Enginyeria Electrònica i Biomèdica, IN2UB, Universitat de Barcelona, C/ Martí i Franqués 1, 08028 Barcelona, Spain.0000-0002-3634-1355MaximGucCatalonia Institute for Energy Research (IREC), Jardins de les Dones de Negre 1, 08930 Sant Adrià de Besòs, Spain.0000-0002-2072-9566VictorIzquierdo-RocaCatalonia Institute for Energy Research (IREC), Jardins de les Dones de Negre 1, 08930 Sant Adrià de Besòs, Spain.0000-0002-5502-313310.21105/joss.05873https://doi.org/10.5281/zenodo.10161346Pythonhttps://joss.theoj.org/papers/10.21105/joss.05873.pdfSpectroscopy, Machine Learning, Explainability and intepretability, Classification and regressiontag:joss.theoj.org,2005:Paper/44892023-12-09T20:29:33Z2023-12-10T00:00:46ZNEMSEER: A Python package for downloading and handling historical National Electricity Market forecast data produced by the Australian Energy Market Operatoracceptedv1.0.42023-05-18 06:44:27 UTC922023-12-09 20:29:33 UTC820235883AbhijithPrakashSchool of Electrical Engineering and Telecommunications, University of New South Wales, Australia, Collaboration on Energy and Environmental Markets (CEEM), University of New South Wales, Australia0000-0002-2945-4757AnnaBruceSchool of Photovoltaics and Renewable Energy Engineering, University of New South Wales, Australia, Collaboration on Energy and Environmental Markets (CEEM), University of New South Wales, Australia0000-0003-1820-4039IainMacGillSchool of Electrical Engineering and Telecommunications, University of New South Wales, Australia, Collaboration on Energy and Environmental Markets (CEEM), University of New South Wales, Australia0000-0002-9587-683510.21105/joss.05883v1.0.7Pythonhttps://joss.theoj.org/papers/10.21105/joss.05883.pdfNEM, National Electricity Market, Forecast, PASA, Pre dispatchtag:joss.theoj.org,2005:Paper/46272023-11-11T03:33:46Z2023-11-12T00:00:50ZMAHOS: Measurement Automation Handling and Orchestration Systemacceptedv0.2.22023-07-27 00:47:09 UTC912023-11-11 03:33:46 UTC820235938KosukeTaharaToyota Central R&D Labs., Inc., Japan0000-0002-9474-897010.21105/joss.05938https://doi.org/10.5281/zenodo.10074373Python, C++https://joss.theoj.org/papers/10.21105/joss.05938.pdfinstrumentation, measurement automation, laboratory automation, distributed systems, solid-state color centertag:joss.theoj.org,2005:Paper/48512023-11-05T18:10:00Z2023-11-06T00:00:24ZMachine Learning Validation via Rational Dataset Sampling with astartesacceptedv1.1.3.post12023-10-16 18:19:35 UTC912023-11-05 18:10:00 UTC820235996JacksonW.BurnsCenter for Computational Science and Engineering, Massachusetts Institute of Technology, Department of Chemical Engineering, Massachusetts Institute of Technology, United States0000-0002-0657-9426KevinA.SpiekermannDepartment of Chemical Engineering, Massachusetts Institute of Technology, United States0000-0002-9484-9253HimaghnaBhattacharjeeDepartment of Chemical and Biomolecular Engineering, University of Delaware, United States0000-0002-6598-3939DionisiosG.VlachosDepartment of Chemical and Biomolecular Engineering, University of Delaware, United States0000-0002-6795-8403WilliamH.GreenDepartment of Chemical Engineering, Massachusetts Institute of Technology, United States0000-0003-2603-969410.21105/joss.05996https://doi.org/10.5281/zenodo.8147205Pythonhttps://joss.theoj.org/papers/10.21105/joss.05996.pdfmachine learning, sampling, interpolation, extrapolation, data splits, cheminformaticstag:joss.theoj.org,2005:Paper/43102023-10-24T14:44:56Z2024-02-07T13:20:12Zgesel: a JavaScript package for client-side gene set enrichmentaccepted0.2.32023-03-15 18:20:39 UTC902023-10-24 14:44:56 UTC820235777AaronTin LongLunGenentech Inc., South San Francisco, United States of America0000-0002-3564-4813JayaramKancherlaGenentech Inc., South San Francisco, United States of America0000-0001-5855-503110.21105/joss.05777https://doi.org/10.5281/zenodo.10032294JavaScripthttps://joss.theoj.org/papers/10.21105/joss.05777.pdfbioinformatics