openeventdata / mordecai

Custom-built full text geoparsing. Extract all the place names from a piece of text, resolve them to the correct place, and return their coordinates and structured geographic information.

eclipse / golo-lang

Golo is a simple dynamically-typed programming language for the Java Virtual Machine (JVM) that has been designed to leverage the capabilities of the Java 7 invokedynamic bytecode instruction and...

bihealth / vcfpy

VCFPy provides a well-documented, easy to use, and pythonic interface to reading and writing VCF files.
It supports VCF v4.3, reading and writing of both plain-text and bgzip-compressed VCF files,...

DannyArends / CTLmapping

CTL mapping is a novel approach to detect genetic regulation of phenotypes in natural and experimental populations. It is a method which complements classical QTL analysis, providing additional...

sanger-pathogens / gff3toembl.git

Converts GFF3 annotated assemblies into a format suitable for submission to EMBL. This is an essential missing step for open, reproducible genomic science and has been used to submit over 30% of...

chtheodoro / Habfuzz

Habfuzz is a fortran tool, which implements the fuzzy inference process to calculate the instream habitat suitability, given the flow velocity, the water depth and the substrate type of a...

paulcon / active_subspaces

The Python Active-subspaces Utility Library provides tools for discovering and exploiting an active subspace in a complex science or engineering simulation model with several input parameters.

ropenscilabs / ezknitr

The 'ezknitr' package is an R package that enhances the functionality and flexibility of the 'knitr' package. It provides the user with complete control over where all the inputs and outputs are,...

kakearney / ecopath_matlab-pkg

This package provides a Matlab-based implementation of the Ecopath algorithm (part of the popular fisheries ecosystem modeling tool Ecopath with Ecosim, as well as a few functions for further...

carlganz / rintrojs

A wrapper for the 'intro.js' library. This package makes it easy to include step-by-step introductions, and clickable hints in a 'Shiny' application.