The use of Q-sets to describe subjective views on a specific research domain, in a way suitable for quantitative data analysis, has a long tradition in psychological research. qsort is a package...
We provide a renovated and cross-platform Python implementation of Ripser, a blazingly fast persistent cohomology package. We incorporating features such as operability with sparse matrices,...
hoggorm implements statistical methods for multivariate analysis typically used in the field of chemometrics (https://en.wikipedia.org/wiki/Chemometrics). The main methods contained in hoggorm are...
idpflex clusters tens of thousands of protein conformations into a modest number of substates that can be analyzed by a researcher. Analysis tools are included in the package. Clustering is...
The R package compboost implements component-wise boosting in C++ using Rcpp and Armadillo to achieve efficient runtime behaviour and full memory control. It provides a modular object-oriented...
q2-sample-classifier is a plugin for the QIIME 2 microbiome bioinformatics platform that facilitates access, reproducibility, and interpretation of supervised learning (SL) methods for a broad...
MCSD is a simple and free open-source MATLAB/Octave tool designed to simulate diffusion processes in complex environments such as biological tissues.
cottoncandy is a python scientific library for storing and accessing numpy array data from cloud-based object stores. cottoncandy obviates the need to write (or read) numpy array data to disk as an...
The JavaPermutationTools (JPT) API provides Java classes that enable representing and generating permutations, as well as performing computation on permutations. This release includes...
Functions and helpers to import metadata, n-grams and full-texts delivered by Data for Research (DfR) by JSTOR.
The package has been reviewed and accepted by rOpenSci.
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