dblarremore / webweb

webweb is a tool for creating, displaying, and sharing interactive network visualizations on the web, designed for simplicity and ease of use. With just a few lines of python, networkx, or matlab,...

DOI pending

FranzKrah / rGUIDANCE

The R package rGUIDANCE computes multiple sequence alignment confidence scores (sequence alignment reliability).

DOI pending

camdavidsonpilon / lifelines

lifelines is a pure Python implementation of survival analysis. Its value comes from its intuitive and well documented API, its flexibility in modeling novel hazard functions, and its easy...

DOI pending

scikit-tda / kepler-mapper

Kepler Mapper is a flexible implementation of the Mapper algorithm from the field of Topological Data Analysis. Mapper is a method for summarizing and visualizing structures in high dimensional...

DOI pending


mpi4py-fft uses MPI for Python (mpi4py) to compute the Fast Fourier Transforms in parallel on distributed architectures.

marouenbg / ACHR.cu

ACHR.cu is a CUDA implementation of Asynchronous Hit-and-Run (ACHR) sampling algorithm of models of biological systems that allows to characterize a large set of metabolic phenotypes in an unbiased...

DOI pending

kLabUM / rrcf

Python implementation of the Robust Random Cut Forest algorithm: an unsupervised ensemble method for anomaly detection on streaming data

shawnbanasick / kade

KADE is a desktop application that provides interactive data visualizations for the analysis of Q methodology data.

DOI pending

RobWHickman / ggparliament

ggparliament is a R package for visualizing legislatures. It handles different parliaments, regardless of the number of legislators, political parties or design of the legislature. It is a ggplot2...

DOI pending

rrwick / Badread

Badread is a tool for the simulation of long sequencing reads, such as those made by Oxford Nanopore and PacBio platforms. It is able to simulate many types of read errors and gives users a great...