MonashBioinformaticsPlatform / varistran

Noise in RNA-seq read count data is commonly modelled as following a negative binomial distribution, where the variance is a quadratic function of the expression level. Varistran transforms read...

DOI pending

domoritz / label_generator

The repository provides software to train a neural network to detect text in screen images. The repository also provides code that generates training data by extracting figures and text masks from...

DOI pending

ETCBC / text-fabric

Text-Fabric is a Python3 package for Text plus Annotations.
It provides a data model, a text file format, and a binary format for (ancient) text plus (linguistic) annotations.

DOI pending

howardjp / bumblebees

Virtual Bumblebees is a generalization of the Langton Ant that allows for three cell states.

mpastell / weave.jl

Weave is a tool for writing scientific reports using Julia. It allows writing of text, mathematics and code in a single document which can be run capturing results into a rich report.

hpchud / vccjs

The Virtual Container Cluster is a framework for building containers that encapsulate parallel and cluster applications. It promotes a high degree of portability and offers easier reproducibility...

Auburngrads / learningCurve

learningCurve is an R package that implements common learning curve production functions. It incorporates Wright's and Crawford's learning curve functions to compute unit and cumulative block...

ednusi / MatPy

This software processes data collected by a Kolsky Bar (https://en.wikipedia.org/wiki/Split-Hopkinson_pressure_bar) which often has noisy and inaccurate data because of the extremely high rate of...

DOI pending

biogo / ncbi

Packages within bĂ­ogo/ncbi provide Go application programmer interfaces to the NCBI BLAST and EUtilities services.

DOI pending

ropensci / lawn

Client for 'Turfjs' (http://turfjs.org) for 'geospatial' analysis. The package revolves around using 'GeoJSON' data. Functions are included for creating 'GeoJSON' data objects, measuring aspects...