Submitting annotated genomes to NCBI GenBank is a complicated, iterative process due to all the quality checks that NCBI's review process entails. This toolkit automates part of this process,...
pyCeterisParibus is a Python library implementing Ceteris Paribus Plots. They allow understanding how the model response would change if a selected variable is changed. It’s a perfect tool for...
AMReX is a C++ software framework that supports the development of block-structured adaptive mesh refinement (AMR) algorithms for solving systems of partial differential equations (PDEs) with...
x11docker allows to run GUI applications in Docker containers.
It is useful for computational reproducibility and reusability of research analyses.
Container technology is the unit of operation to ensure everything from scientific reproducibility to reliable enterprise deployment. However, despite this growing popularity, the actual study of...
prysm is a module for optical simulation and anlysis using Fourier/Physical optics methods.
Capytaine is a complete refactoring of the open source linear potential flow solver Nemoh, with a more modern implementation and a Python user interface.
It is meant to be used to compute the...
The tool aims to guess the RNA-Seq library type used to generate paired or single end read files.
Scikit-fdiff is a python library that aim to solve partial derivative equations without pain.
treex is a Python library for manipulating rooted trees. The trees can be ordered or not, with or without labels on their vertices. The package provides a data structure for rooted trees as well as...
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