ben-aaron188 / netanos

NETANOS is a natural language processing software that facilitates the sharing of unstructured text data in the spirit of open science. By identifying and replacing named entities, it allows...

DOI pending

csu-hmc / opty

opty utilizes symbolic descriptions of ordinary differential equations expressed with SymPy to form the constraints needed to solve trajectory optimization and parameter identification problems...

DOI pending

barbagroup / AmgXWrapper

This code provides access to multi-GPU computing from PETSc-based applications, using NVIDIA's AmgX library.

DOI pending

arfc / moltres

Moltres is a physics application for multiphysics modeling of fluid-fueled molten salt reactors (MSRs). It couples equations for neutron diffusion, thermal hydraulics, and delayed neutron precursor...

DOI pending

statsmaths / kerasR

Provides a consistent interface to the Keras Deep Learning Library directly from within R. Keras is a library for describing neural networks (Dense, Convolutional, and Recurrent), training them on...

OpenSpace / OpenSpace

OpenSpace is an extensible interactive data visualization software framework designed to visualize the entire known universe and portray our ongoing efforts to investigate the cosmos. It is...

DOI pending

rasbt / biopandas

BioPandas is a tool for parsing molecular structures from coordinate filed into pandas DataFrames for easy analysis and processing. In addition, BioPandas contains functionality for basic structure...

bede / kindel

This software generates a consensus sequence from a nucleotide sequence alignment in SAM/BAM format, and facilitates analyses of low frequency variation with a diverse viral population.

DOI pending

dib-lab / khmer

The khmer software is a set of command-line tools built around a Python library designed for k-mer abundance analysis, sequence quality control, assembly graph traversal, and more.

DOI pending

mwmclean / RefManageR

RefManageR provides tools for importing and working with bibliographic references. It greatly enhances the bibentry class in R by providing a class BibEntry which stores BibTeX and BibLaTeX...

DOI pending