bede / kindel

This software generates a consensus sequence from a nucleotide sequence alignment in SAM/BAM format, and facilitates analyses of low frequency variation with a diverse viral population.

dib-lab / khmer

The khmer software is a set of command-line tools built around a Python library designed for k-mer abundance analysis, sequence quality control, assembly graph traversal, and more.

mwmclean / RefManageR

RefManageR provides tools for importing and working with bibliographic references. It greatly enhances the bibentry class in R by providing a class BibEntry which stores BibTeX and BibLaTeX...

dhermes / bezier

This is a Python library (with Fortran speedups) for performing operations on Bézier curves and surfaces of arbitrary degree.

eclipse / mosquitto

Standards compliant server and client implementations of the MQTT messaging protocol, which is widely used in Internet of Things applications.

python-windrose / windrose

A Python Matplotlib, Numpy library to manage wind data, draw windrose (also known as a polar rose plot), draw probability density function and fit Weibull distribution

DOI pending

scikit-hep / root_numpy

root_numpy is a Python extension module interfacing NumPy with CERN’s ROOT software framework, providing the ability to analyse ROOT data within the broad ecosystem of scientific Python packages.

CLOOPSy is a mobile application designed with the aim to collect data from a crowd of volunteers. In particular, the idea is to ask them to contribute with a picture and to select a land cover...

neuropsychology /

Neuropsydia for Python is a module for psychologists and neuroscientists, designed for creating experiments, tasks and computerized questionnaires.

Lab::Measurement allows to perform test and measurement tasks with Perl 5 scripts. It provides an interface to several instrumentation control backends, as e.g. Linux-GPIB or National Instruments'...

DOI pending