genenetwork / genenetwork2

GeneNetwork (GN) is a free and open source (FOSS) framework for web-based genetics that can be deployed anywhere. GN allows biologists
to upload experimental data and map phenotypes interactively...

dfm / corner.py

This Python module uses matplotlib to visualize multidimensional samples using a scatterplot matrix. In these visualizations, each one- and two-dimensional projection of the sample is plotted to...

phenoscape / scowl

Scowl is a domain-specific language (DSL) which provides a convenient Scala-based syntax for composing OWL (Web Ontology Language) expressions and axioms.

jtauber / pyuca

Python implementation of the Unicode Collation Algorithm enabling proper collation (string sorting) of non-English words with applications in corpus linguistics and digital humanities.

PeteHaitch / GenomicTuples

GenomicTuples defines general purpose containers for storing genomic tuples in R. It aims to provide functionality for tuples of genomic co-ordinates that are analogous to those available for...

genomematt / xenomapper

Xenomapper is a utility for post processing mapped reads that have been aligned to a primary genome and a secondary genome and binning reads into species specific, multimapping in each species,...

applicationskeleton / Skeleton

Application Skeleton is a simple and powerful tool to build simplified synthetic applications with runtime and I/O close to that of the real applications.

harpolea / r3d2

This code extends standard exact solutions of the relativistic Riemann Problem to include a reaction term. It builds on existing solutions for the inert relativistic Riemann problem and of the...

jakevdp / mst_clustering

This package implements a simple scikit-learn style estimator for clustering with a minimum spanning tree.

diana-hep / carl

Carl is a toolbox for likelihood-free inference in Python.