mathLab / PyDMD

PyDMD implements the dynamic mode decomposition (DMD) algorithm and the majority of its variants. It is an equation-free algorithm, since it relies only on the high-fidelity measurements, like...

rreinecke / global-gradient-based-groundwater-model

The global gradient-based groundwater model framework G³M-f is an extesible model framework.
Its main purpose is to be used as a main building block for the global groundwater mode G³M.
G³M is a...

jakobbossek / grapherator

Set of functions for step-wise generation of (weighted) graphs. Aimed for research in the field of single- and multi-objective combinatorial optimization. Graphs are generated adding nodes, edges...

nterhoeven / reper

reper is a pipeline to detect repetitive sequences in genome sequencing data. The detection is based on kmer frequencies and does not rely on a genome assembly.
This allows an analysis of repeat...

ropensci / tidyhydat

Provides functions to extract historical and real-time national hydrometric data from Water Survey of Canada data sources http://dd.weather.gc.ca/hydrometric/csv/ and...

openclimatedata / pymagicc

Pymagicc is a thin Python wrapper around the reduced complexity climate model MAGICC6, wrapping the CC-BY-NC-SA licensed MAGICC6 binary.
It makes the MAGICC model, widely used in climate change...

warrenlr / xmatchview

Here we present xmatchview and xmatchview-conifer, tools for visualizing DNA sequence synteny.

scikit-learn-contrib / categorical-encoding

Category encoders is a scikit-learn-contrib package containing different transformers for encoding categorical data as numeric. This includes support for commonly used encoders such as one-hot or...

bjodah / pyodesys

pyodesys provides a straightforward way of numerically integrating systems of ordinary differential equations (initial value problems).
It unifies the interface of several libraries for performing...

sjspielman / phyphy

phyphy is a Python package aimed to facilitate and simplify usage of the popular bioinformatics software platform, HyPhy, in two primary ways: i) execute standard HyPhy analyses directly within the...